Phragmites australis (common reed): 133889841
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Entry
133889841 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133889841 isoform X1
KO
K11096
small nuclear ribonucleoprotein D2
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133889841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133889841
03032 DNA replication proteins [BR:
paua03032
]
133889841
Spliceosome [BR:
paua03041
]
Complex A
U1 snRNP components
Sm proteins
133889841
U2 snRNP components
133889841
Complex B
U1 snRNP components
133889841
U4/U6.U5 tri-snRNP components
133889841
Complex C
U2 snRNP components
133889841
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
133889841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
133889841
NCBI-ProteinID:
XP_062186303
LinkDB
All DBs
Position
13:complement(22449657..22452235)
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AA seq
105 aa
AA seq
DB search
MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagaatcaggctggaaagaaagaggaggaggaatttagcacaggtcctttg
tctgtcctaatgatgagtgttaagaataacacccaggtgctcatcaattgccgcaacaac
aagaagctacttggtcgtgttcgcgcgtttgatcgccactgtaacatggtgctcgagaat
gtgcgggaaatgtggacggaggtccccaagactggcaagggcaagaagaaagctctgcct
gtgaacaaggacaggttcatcagcaagatgttcctcaggggcgactccgtcatcatcgtg
ctgaggaacccaaagtga
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