Phragmites australis (common reed): 133889846
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Entry
133889846 CDS
T10575
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133889846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paua03400
]
133889846
Enzymes [BR:
paua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
133889846
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133889846
Prokaryotic type
133889846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
LED_rpt
Motif
Other DBs
NCBI-GeneID:
133889846
NCBI-ProteinID:
XP_062186311
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All DBs
Position
13:complement(30884157..30890211)
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AA seq
302 aa
AA seq
DB search
MAPSPPTPTAPKTIADFFTRPAKRLRAGAPVPAASLSSSASSLSPEQRRRADTNLALARS
RRNLRLVESKAKGGTAKLEELLVEETWLEAFRGELRKPYALELCRFVSHERLHGPLPVYP
PPHLVFHALNATPFDRVKAVIIGQDPYHGPGQAMGLSFSVPEGIKIPSSLGNIFKELEKD
LGCTVPSHGNLERWAVQGVLMLNTVLTVREHQANSHAKKGWEQFTDAVIKTISQKKSGLV
FLLWGNSAQSKTRLIDETKHHILKAAHPSGLSAHKGFFGCRHFSKTNKILESLGLSAIDW
QL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtcccctcccaccccgaccgcgcccaaaaccatcgccgacttcttcacgcgc
cccgccaagcgcctccgtgcaggcgctcccgtccccgctgcttccctctcctcctccgcc
tcctcgctctcgccggagcagcgccgccgcgccgacaccaacctcgcgctcgcccgctcg
cgccgtaacctccgcctcgtcgagtccaaagccaaaggaggcactgcgaagctggaggaa
cttctcgtggaggaaacgtggctggaggcgttccggggagagctgcgcaagccctacgcg
ctcgagctctgccgcttcgtcagccacgagcggctgcacggcccgctgcccgtctacccg
ccgccgcacctcgtattccacgcgctcaacgccaccccgttcgaccgcgtcaaggctgtt
atcatcggccaggatccataccatggtccaggtcaggccatgggattgtctttctcagta
ccagaggggataaaaataccttccagcttaggtaacatatttaaagagctggaaaaagac
ctaggttgcactgtgccatcgcatggaaatttggaaagatgggctgtgcagggtgttctt
atgctcaatactgtactaactgtgagggagcatcaagccaactcacatgccaagaaaggg
tgggagcagtttactgatgctgttattaagactatatcacaaaagaaatcaggacttgtc
tttcttctctggggaaattctgctcagtcaaagacaagattgattgatgaaacaaaacat
cacattttgaaagctgctcacccatcaggcctgtctgcgcataagggtttctttggatgc
aggcacttttcgaaaacaaataagatcttggagagtctgggactatctgccatcgattgg
cagctctag
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