Phragmites australis (common reed): 133890151
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Entry
133890151 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133890151 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133890151
Membrane trafficking [BR:
paua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133890151
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
133890151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40
WDR55
WD40_Prp19
Beta-prop_HPS5
Synaptobrevin
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
133890151
NCBI-ProteinID:
XP_062186583
LinkDB
All DBs
Position
14:30673137..30682811
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AA seq
1158 aa
AA seq
DB search
MGPRLDKGRPPPLLSLGPKPKAKHATSQSVSQSTTPSPSVETKPSTAMFAKRLFHKALHH
QGGGGGGGGPAGDVAEMDAQIALHYGVPYTASVLAFDPVQRLLAIGTLDGRIKIFGGDNI
EGLLISPKSVPYKFVQFIQNQGLLVAISNDNEIQVWNLEFRQLFYSSQWDVNITAFAVID
GTFLMYLGDENGLLSVLKYDVDDGKLQRMPYNVPIQSLAEAAGVSLQDPQPIVGILPLPD
TFGTRVLIAYEKGLLVIWDVSEDHAISIRGYGDLHMKGQVTGAQRDAGEDQLDNTIDESE
EEREICSLCWASKGGSTVAVGYITGDILLWDMTTRSSRQDKQSDASSNVVKLQLASGSRR
LPVIVLHWSAGSALDTKKGGHLFVYGGDDMGSEEVLTVLSLESTAGLESLSCMSRMDLKL
DGSFADMILIPDTGVPDKSRTSALFILTNPGQLNFYDGGSLFSVQNTKEGNALPEAQKFP
VAVPTIDPNITVTNLCSLSGREFPNISLKKFCARQSATPFISGNMKWPLTGGVPSEMSLN
EDHAVERIYIAGYQDGSVRIWDATFPVLMPMFVLDGKVAGVNLDGANASVSSLAFCSSNM
ILAVGATSGLVRIYKLREHTGDSSFHFVSESKQEAHVVHHARGFHCHVAFMASNSPVRSL
LFTASGEVLAAGYQNGQVAMFDPSQLSIIFAVDCASGTNSPVVSLSINSIAASATKEDQS
KKESKKSAKLPRDVLLSLTKDARVTVLDTTTGVMINSHLLDQKQSSAVSMYVIDGASDEN
QTRLSEEKSPSQGQTGKGNYVDRKQAQGVEKHPKNAPQLSNNGGLDSLLLVCCEDVLLLF
SMVLLIQGSSKHLHKTKLAKPCRWSSVFKNMDDKICGLILAYETGTIELRSVPDLAVVAD
SSLMSLLRWSYKTGMEKSTSSSNGQIALVNGSEFAIISLVASENDFRIPESLPSLHDKVL
AAAADAAITFSTDQRRKQNPAGIFGGIIKGMKDKAEGNTKIKGSFTEQIPSEHLESIFLK
ESFVEPSIPNPDDPIEELSIDDIVIDDEVSLAPAPASSSTSHVNKKTTVEEERAKLFEGS
SDVDKPRMRTPQEILTKYKFGGDAAAAAAHAKDKLMQRQEKLERISQQTAELQNGAENFA
SLAQELAKKMENKKWWKL
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgggcccccgtttagacaaaggaaggcctcctcctttgctttctctgggcccaaaaccc
aaagcgaagcacgccaccagtcagtcagtcagccagtcgaccacgccgtcgccgtccgtc
gagaccaaaccatcgacggcgatgtttgcgaagcgcctcttccacaaggctctccatcat
cagggagggggagggggaggaggaggacctgctggggacgtagccgaaatggatgcgcag
atcgcgcttcactacggggtgccctacaccgcctcagtcctcgcgtttgatcctgtccag
cgcctcctcgccatcggaacgctagatggtaggataaaaatatttggaggcgataacatc
gaaggcctcctcatatcaccgaagagtgtcccatacaagtttgtgcagtttatacaaaat
caggggcttctggttgccatctctaacgataatgaaatccaggtatggaatcttgagttc
aggcaactattttattcttcccagtgggacgtcaacattactgcttttgcagtcatagat
gggacctttctgatgtaccttggagatgagaatggtcttctttctgtattgaagtatgat
gtagatgatgggaagcttcaaaggatgccatacaatgttcctatacagtccttggccgaa
gcggctggtgtttccttacaggatcctcaacctattgttggaatactgcccctacctgac
acttttgggacaagggtgctaattgcatatgagaaagggttgttagttatttgggatgta
tcggaggaccatgcaatttctattagaggctatggggatttacacatgaagggtcaagta
actggtgctcagagggatgctggtgaagatcaattggacaatactattgatgaaagtgaa
gaagagagggaaatttgttctctttgttgggcatcaaaagggggctcaaccgttgctgtt
ggctatataacaggagacatacttctatgggatatgactacaagatcctctaggcaagac
aagcaaagtgacgcttcatctaatgttgttaagctgcagctggcttcaggaagccgtagg
cttcctgttattgtcttgcattggtctgctgggtcagcactggatactaagaaaggaggg
catctttttgtatatggtggtgatgatatgggatctgaagaagttctcacggttcttagc
ttggaatcgactgctggattagaatcactaagttgcatgtcgcggatggacctcaagctt
gatggatcctttgctgatatgattcttattccagatactggggttcccgataaaagccga
acttcggcacttttcattttaacaaatcctggacaattgaatttttatgatggtggttct
ctattttctgtgcaaaacacaaaagagggaaatgctctgcctgaagcacagaaatttcca
gttgcagttcctacgattgatcccaacataacagtcacaaatctttgttcactatccgga
agggaatttccaaatatttcactaaagaaattttgtgctaggcaaagtgccacacctttc
atatcagggaacatgaaatggcctttgactggcggggttcctagtgagatgtcactgaat
gaagatcatgctgttgaaagaatatacattgcaggctaccaagatggttctgtgagaata
tgggatgcaacatttccagttctgatgccaatgtttgttttggatggaaaggtggctggt
gttaatttggatggagcaaatgcttctgtatcatctctggctttttgttcatcaaacatg
atattggctgttggggcaacaagtggtctggtccgcatctataaacttcgtgagcacact
ggagattcaagctttcactttgtgagtgaatctaagcaagaagctcatgttgttcatcat
gcgagagggtttcattgtcatgttgcctttatggcatcaaattccccagtgcgatctctc
ctatttacagcttcgggagaggtccttgcggcaggctatcagaacggtcaggtggcaatg
tttgatccgagtcagctatcaattatattcgctgtggattgtgcatcaggaacaaactct
cctgttgtttccttgagcattaacagtatagctgcatctgctacaaaagaagatcagtca
aagaaagaaagtaaaaaaagtgcaaaattacccagagatgttcttctttcattgacaaag
gatgctcgcgttactgtacttgacaccacaactggtgtgatgataaattcacatctctta
gatcagaagcaatcatctgctgtttccatgtatgtcatagatggagcttcagacgagaac
caaactcgattatcagaagaaaaatccccaagtcaaggtcagacaggaaaaggcaattat
gttgacagaaaacaagcacaaggagttgaaaagcacccaaaaaatgctccccagctttca
aacaatggtggtttagattcacttcttttggtctgctgtgaggacgtgctgcttttgttt
tcgatggtactgttaattcagggaagcagcaagcatctacataagacgaaacttgcaaaa
ccttgtcggtggtcatcagttttcaagaacatggatgacaaaatttgtgggttgatatta
gcttatgagacaggcacgatagaattgagatctgtgccagacctggctgttgttgctgat
agctccttgatgtcattattaagatggagttacaagacaggcatggaaaaatccacaagc
tcttcaaatggacaaattgctctggtaaatggatctgaatttgcgatcatctctctcgta
gcctcagagaatgacttcaggattccagaatctctgccgtcccttcatgacaaagtactt
gcagcagctgctgatgcagctattactttctcaactgaccagagaagaaagcagaatcca
gcaggaatttttggtggcatcattaaaggaatgaaagacaaggctgaaggaaacacgaaa
attaaaggaagtttcactgagcaaatccccagcgaacatttggagtcaattttcttgaaa
gaatcgtttgttgaaccatcaatacccaatcctgatgatccaatagaagaactgtcgatt
gatgacatagtgattgatgatgaagtatcactagccccggcaccagcatcatcctctaca
tcacacgtgaataagaaaacaacagtagaggaggagagagcgaaactatttgaagggtca
agcgatgttgataaaccaagaatgagaactccacaggaaattctaaccaaatataagttt
ggcggggatgcggcggcagcagctgctcatgcgaaagataagctcatgcaacggcaggag
aaactagagagaataagccaacaaaccgcagagcttcagaatggagcagaaaactttgct
tcgctcgcccaggagcttgcgaaaaaaatggagaacaagaagtggtggaagctataa
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integrated database retrieval system
