Phragmites australis (common reed): 133890467
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Entry
133890467 CDS
T10575
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133890467
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133890467
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
133890467
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_22
AAA_16
AAA_30
AAA_29
RsgA_GTPase
AAA_21
AAA_25
AAA_5
AAA_28
AAA_14
AAA_33
DUF87
SRP54
nSTAND3
Motif
Other DBs
NCBI-GeneID:
133890467
NCBI-ProteinID:
XP_062186828
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All DBs
Position
14:16024068..16043715
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AA seq
701 aa
AA seq
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MAISTWSARLLLLPVSSRAIPTLIPNPSRLPSCRRLHALRLGRPRPPRAYISAPAPGPEA
AYAPPSLDAAAAAADVAAAICSSSDAVTWAGVWALLSQHKARIVVSLAALLACTTCTLSM
PLFSGRFFETLIGRGNEPLWRLLSKIAVLYTLEPIFTIIFVINMTVIWEKVMARLRSQIF
RRILIQKMVFFDRHKVGELTGLLTSDLGSLKSVVSDNISRDRGLRALSEITGTLCILFTL
STELAPVLGLLMVSVSMLVALFKRSTVPTFKSYGIVQARISDCASETFSAIRTVRSFGGE
KRQISLFDNLVRVYQNSGTKLGVLKSANESLTRVVVYVSLMALYVLGGSKVNAGKLSVGT
MASFIGYTFTLTFAVQGAVNTLGDLRGAFASIERINSILSAKDIDDSLAYGLAKELDSKE
LEDSNGGVYENGPINKHFMSALKSSSSCSNLAWSGDIHLKDVHFSYPLRSDVEILNGLDL
TIDCGQVTALVGSSGAGKSTVVQLLARYYEPTQGCITVAGEDIRVFDKREWSRVVSLVNQ
DPVLFSVSVGENIAYGLPDDVVSKDDIIKAAKAANAHEFIISLPQGYDTLVGERGDLLSG
GQRQRIAIARALLKNAPILILDEATSALDATSERLVQEALNHLMKGRTSLVIAHRLSTVQ
NAHRIAVCSEGKITELGTHTELVAKGGSYASLVGTQRLAFE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctccacctggagcgcgcgcctcctcctcctccctgtttcctcccgcgccatc
ccgacccttatcccaaacccaagccggctcccctcctgccgccgcctccacgcgctccgc
ctcggccgcccccgcccaccccgggcctacatctccgcgccggcgccggggccggaggcc
gcctacgcgccaccctccctcgacgccgcagcggcggcggccgacgtcgccgccgcgatc
tgctcctcctccgacgccgtcacctgggccggcgtctgggccctgctctcgcagcacaag
gcccgcatcgtggtctcgctcgccgcgctcctcgcctgcaccacctgcaccctctcgatg
ccgctcttctcagggaggttcttcgagacgctgatagggagggggaacgagcccctgtgg
aggctcctatcgaaaatcgcggtgctatacacgctggagcccatcttcacaatcatattt
gtgatcaacatgactgtcatctgggagaaggttatggccaggctgcggagccagatattt
cgaaggattctgatccaaaagatggtgttttttgatcgtcataaggttggtgagttgacc
ggtttgttgacatctgatttgggttccttgaagagtgttgtaagtgataacatatcaaga
gatcgtgggctaagggcactctctgagatcactggtacactttgtatacttttcacacta
tctactgagctagctcctgttctagggcttctaatggtctccgtttccatgctagttgct
cttttcaagagatctactgttcccacttttaaatcttatggaattgtgcaagcacgcata
tcagactgcgcatcagagacattttcagctattcgtactgttcggtcctttggcggtgaa
aaacgacaaatttctttgtttgacaatttggtacgtgtttaccaaaatagtggtacgaaa
ctaggagtgctgaaatctgctaatgaatcattaacacgagtagtggtttatgtttccctt
atggcgctttatgttcttggtggaagcaaggtcaatgcgggcaaattgtctgttggaaca
atggcatcttttattggttacacgttcacgttaaccttcgctgttcaaggagctgttaat
acccttggtgatctacgcggagcgttcgcttctatagagagaataaattctattctgtcg
gcaaaggacattgatgattcacttgcatatggtttagccaaagaacttgacagcaaagag
cttgaagattccaatggtggagtgtatgaaaatggccctattaataaacatttcatgtca
gcattgaaatcttccagtagctgtagtaatctagcctggtctggtgacattcatctgaaa
gacgtccacttctcttacccactgagatctgatgtggagatcttaaacggccttgatctt
acaattgactgtggacaagtcacagctcttgtagggtctagtggtgctgggaaaagcaca
gtggtgcaacttttagcacggtactacgagccaactcaaggttgcatcaccgtggcaggg
gaagacatccgcgtatttgacaaaagagaatggtctcgagtagtatctctagtgaatcag
gacccagtcctattctccgtatctgttggagaaaatattgcttacggtctcccagatgac
gttgtctccaaggatgatataataaaagctgctaaagctgccaatgctcacgaattcatc
atctctcttccacaggggtatgacactcttgttggtgaacgaggtgatctcctaagtggg
ggacaaagacagagaattgcaattgcacgagcccttctgaaaaatgctcctattctaata
cttgacgaggctaccagtgcactggacgcaacaagcgaacggctcgtgcaggaggctctc
aatcacttgatgaagggaaggacatctctggtgattgcacacaggttgagcactgtgcag
aatgcgcatcgaattgctgtttgctcggagggcaagataactgaactggggacacacacc
gagctggttgccaagggaggcagttacgcatcacttgtcgggacacagaggcttgcgttc
gagtaa
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