Phragmites australis (common reed): 133890618
Help
Entry
133890618 CDS
T10575
Name
(RefSeq) eukaryotic translation initiation factor 4G-like
KO
K03260
translation initiation factor 4G
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133890618
03012 Translation factors [BR:
paua03012
]
133890618
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133890618
mRNA cycle factors
Stress granule specific factors
133890618
Translation factors [BR:
paua03012
]
Eukaryotic type
Initiation factors
eIF-4
133890618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
133890618
NCBI-ProteinID:
XP_062187059
LinkDB
All DBs
Position
14:22994575..23002846
Genome browser
AA seq
1817 aa
AA seq
DB search
MSQRGDRGEGHARRPGRSSSFGGHRGGGVGGAGKGGGGPSGQPPLSSNRSFRKPGNGHGG
HQRVVSQPDTTGFQPAPAPRPLQTPARPPPSPQNAAAHIPLPVPRPQHHDPQVLSVSPAT
ENPANTQLPKNTPHAAPRVPPKSSNPPVPQGPLKGEPPKGFNFQFGSINMNGIPQFPART
SSAPPNLDEQKRNQALLGELKGTPSTPVQPALKQQQLQQQLSQPQPLLQQKQQQQPQQPQ
QQQTRKDAVGSSHPNSVNPHISSQVKRDVHVSPSVPNVAPLRPTVQSISGMTMSIPFQFG
GHGPQMQPQVPLQFGGHGPQMQPQVVPSSLQMSMGLTGGNAPQVPQQLYVPTIHQLQQQA
MMQGQGIGYVSSAGHQFPPQLGNIPMSIAPQYTQTRKTTVKITHPDTHEELKLDKRMDSS
GQRASPNLTPQSQPVSSYNPLMGFYHQSSIYYPPTTGVSQVATASSGPRFNYPVTQSGQA
MTYISPSAGPVAPGQSQITVKPYLGGLQTEKSGTHTVTISAPPGKSDALKLRPAEDAAPN
QQKDEEVVSGITVSNKSAHEKESKAPSEKHPTVVSQSLPVQGVKPETSVTVSPVANSVSP
MSGTEGKNKETIQRTESFKDNRKNATKKDARNLSQQPQPASSAEDFKVQTSVKVGGDGGD
HLEAKNTSSSSASMVALSESRISPVAGTAEVDSTPVNAVDVPGTDKSSAKPASEGTGEPQ
GVESFAVSAIECEESKRTHKVPTDPCKDDISSDVTERESPEVSAVDMSVQASAVTPNTDN
SDATPHVTDQEQSLKESTLSGSEEQDIMNGPSKNSETLSDFLDGNAVAVTTSETSESDVQ
SANDKGDSDISQETVLAVSSVTLVASEAPQKSESMVDDQPSGAPTVSSRPVSREKPGVEI
TRTKSTAGKKKKRKEMLSKADAAGTSDLYNAYKGPEEKLETIGTAEDADSSSTVDATVLP
DESEGEVNTSAYDGKKKVEPDDWEDAADMSTPKLQSSDSGDQAGVTQVLDSDTTEANGRK
KYSRDFLLTLSQHCTGLPFGFQLNDVATANALMNNLAGKSYIVDREPHPSPGRGIDRPGS
RGDRRGAAMADDRWTKSGVPLSPGLDTHMDLTNGPSIINYRGAPGVNHGVLRNPRGQPSS
HHGGGLLVGPMQSIGPQIPRSGSDADRWQQKGLMPSPVTPMQTMHKAERKYVIGKVSDEE
EAKQRQLKGILNKLTPQNFEKLFEQVKEVNIDNVATLTGVISQIFDKALMEPTFCEMYAN
FCVHLASALPDFSEDNEKITFKRLLLNKCQEEFERGEREEAEADKTEEDGEIKQTKEERE
EKRIRARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGNYQDPDEENIEALCKLMGTI
GEMIDHAKAKEHMDAYFDILQKMSISQKLSSRVRFMLRDSIDLRKNKWQQRRKVEGPKKI
EEVHRDAAQERHAQTSRLGRGSVSSAPRRGPPPMDYGTRGSALASQSSQQGSTRGMPPHS
RGFGSQDIRFDERRQFDNRTVPLPQRPVKDEPITLGPQGGLARGMSIRGQSLASNAELPS
VVDHRRMVSGSNGYNSVADRTSSTGREDPSSRIPDRTSGRTAASTQSAGLSHRPASQEGR
SGIKSYSEDDLREKSVAAIREYYSAKDEKEVALCIEELNAPSFYPSVVSLWVNDSFERKD
MERELLAKLFVSLCNGRHDLLSKRQLIDGLAFVLASLEDTLSDAPRATEYLGRLLARFVQ
ENILPLQEVGRLIQEGGEEPGYLVRDGIAADILGAVLEAIKLGKGDSFLNEAKSSSNLKL
EDFRPQHLKRSKLDAFM
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcgaggggacaggggcgaggggcacgccaggagacccggccggtccagcagc
ttcggcggccaccgcggaggcggagtcggcggcgcaggcaagggcggcgggggcccctcc
ggccagcctcccctctcatccaaccgcagcttcaggaagcctggcaatggccatggcggg
caccagagggtggtgagccagcctgacaccaccggcttccagcccgctcccgcgcccaga
cccctccagacgccggcacgcccgccaccctcaccacagaatgctgcagcgcacattccc
ctcccagtgccacggccgcagcaccacgatcctcaagtactatcggtatcacctgctacc
gagaatcctgcaaatacgcagttgccaaaaaatactcctcatgctgccccaagggtacca
cccaagagctccaatccaccggttcctcagggaccattgaaaggggaaccacccaaggga
tttaactttcagtttggtagtataaacatgaacgggattccgcaatttcctgctaggaca
agctccgctccgccaaacttagacgagcaaaaacgtaatcaggcacttctgggggaactt
aaaggtacaccttctacgccagtacaaccagctctgaaacagcagcaattgcagcagcag
ctgtcgcagccgcagccgctgcttcagcagaagcaacagcagcagccacagcagccgcag
cagcaacagacaagaaaggatgctgttggttctagccatcctaactccgtcaaccctcat
atttcatcacaagtgaaaagagatgtgcacgtttctccatctgtccctaatgttgcaccc
ctaaggcccactgttcagtcaatttctggcatgaccatgtcgattccctttcagtttggt
ggtcatggtccacagatgcaaccacaagttcccttgcagtttggtggtcatggtccacag
atgcaaccacaagttgtccctagctcattgcaaatgtcaatgggattgactggcggtaat
gcaccgcaggttccacagcagctatatgtcccgactatccatcaattgcaacagcaagca
atgatgcaagggcagggtatcggttatgtttcttcagctggtcatcaatttccacctcag
ttgggcaacattcctatgagcatcgcaccacaatatactcaaactcggaagactactgtc
aaaattactcatccagacactcatgaagagttgaagcttgataagaggatggactcttct
ggccagagggcttcacctaatttgacaccacaatcccagccagtcagtagttacaatcct
cttatgggcttttatcatcagtcatcaatctattaccctcctactactggcgtcagccag
gttgctactgcatcctctggtcctaggtttaattatcctgtcactcagtctgggcaagca
atgacgtacatcagcccatctgcagggcctgtggcacctggccagtcccaaatcactgtt
aaaccataccttggtggtttgcaaacagaaaaatctgggactcatacggtcacaattagt
gcgccaccaggcaaatcagatgcactgaagttaaggccagctgaggatgctgcaccaaat
cagcagaaggatgaagaagttgtttctgggatcactgtttctaataaatcagcccatgag
aaggagagtaaagctccgtcagagaagcatcccactgtggtgagccaatccttaccagtt
caaggtgtaaaaccagaaacttcagtgacagtgtctcctgttgcgaattcagtctcacct
atgtccggaactgaagggaagaacaaagaaaccattcaaaggactgaatcatttaaggat
aataggaagaatgccactaaaaaggacgccaggaatttgtctcaacaaccacagccagct
tcatctgctgaagattttaaggtgcaaacttctgtaaaggttgggggtgatggtggtgat
cacctggaagctaagaacaccagctcatcttctgcctcaatggttgcactgtctgaaagt
aggatttctccagtggctggtacagctgaagttgacagcacacctgtaaatgctgttgat
gttcctgggacagataagagctctgcaaaaccagcctctgagggtaccggtgagcctcaa
ggagtagaaagctttgctgtttctgctattgaatgtgaggaaagcaagcgaactcacaaa
gttcccacagatccttgcaaggatgatatttcttccgatgttactgaacgtgaatcacct
gaagtatctgcagtggacatgagtgtgcaggcatcagcagtgactcctaacactgataat
tcagatgcaacacctcatgtaaccgatcaggaacagtcactgaaagagtcaacactatct
ggatctgaggaacaagatataatgaatggtccatccaagaattctgaaactttgtcagat
tttcttgatggcaatgctgtggctgtgacaacttctgaaacttcggaatctgatgttcaa
agtgccaatgataaaggtgactcagatattagtcaggaaacagttttagctgtttctagt
gttactctagttgcatcagaggcgccacaaaaatctgaaagtatggtagatgatcaacca
agtggtgcaccaacagtttctagtcgaccagtatcaagggaaaaacctggtgtggagatt
accaggacaaagtctacagctgggaagaagaagaagagaaaggaaatgctttctaaagct
gatgccgctgggacttcagatctttataacgcatacaagggaccagaggaaaagttagaa
actatcggcactgcagaggatgctgatagttcttcaacagttgatgcaactgtgctgccc
gatgaatcagaaggggaggtcaatacatctgcatatgatggtaagaaaaaagttgagcct
gatgactgggaagatgcagcagacatgtctactccaaagctgcaaagttcagattctgga
gatcaggctggcgtcacacaagtattagattcagatacaactgaagctaatggcaggaag
aaatactcacgggattttctgctaactttatcacagcactgtactggtcttcctttcgga
tttcagctaaatgatgttgccactgccaatgctcttatgaataatttggcaggaaagtcc
tatattgttgatcgtgagcctcaccctagtcctggaagggggatcgacaggccaggttct
cgtggagatcgccgtggtgctgccatggctgacgataggtggacaaaatcaggtgttcct
ctcagtcctggtcttgatacccacatggacttgacaaatggtccatcaattatcaattac
cgtggtgcccccggagttaatcatggtgttttgaggaatccacgtggtcaaccatcaagt
caccatggtggtggacttcttgtaggaccgatgcaatccattggacctcaaatacctcgc
agcggctctgatgcagatagatggcagcaaaaaggtctgatgccttctcctgtcacaccc
atgcaaacaatgcacaaagcagagagaaagtatgttattggcaaagtttcagacgaggaa
gaggcgaaacagaggcagctgaaaggcattcttaataagttgactcctcaaaactttgaa
aaactttttgaacaagttaaagaagtcaacattgacaatgtggcaactcttacaggggtc
atttcacagatatttgacaaagctttgatggaaccaactttctgtgaaatgtatgctaat
ttttgtgtccatttggctagtgccttgccagactttagtgaggacaacgaaaaaatcaca
ttcaagagattgcttttgaacaaatgccaagaggagtttgagaggggtgaaagagaagaa
gctgaagctgataaaacagaagaggatggtgagattaagcaaaccaaagaagaaagggag
gaaaagagaatccgtgctcgaaggcgcatgcttgggaacattaggttaatcggagaattg
tacaaaaagaggatgttgacggaacggatcatgcacgagtgcattaaaaaactgttagga
aattaccaagatcccgatgaagaaaacattgaagcactatgcaaattgatgggtacaatt
ggagagatgatagatcatgcaaaggcgaaggaacacatggatgcctattttgatatcttg
cagaagatgtcaataagtcagaagttgtcttctcgtgttaggtttatgttgagagattca
attgacctgaggaaaaataaatggcaacagagacgtaaagttgaaggccccaagaagatt
gaggaggttcacagggatgcagctcaggaaagacatgctcaaacaagtaggctaggacgt
ggttcagttagttccgctccaagaagaggaccaccacctatggattatggcacacgtggc
tcggcattagcatcccaaagttcgcagcaagggagcactcgaggaatgcctccacattca
cgtggattcggttcacaggacatccggtttgatgaaaggcgtcagtttgacaatagaact
gttcctcttccccagcgtcccgtcaaggatgaacctatcactcttgggccacaaggtggc
cttgctaggggtatgtccataagagggcagtcgctagcatcgaatgctgaacttccttct
gttgttgaccatcgcaggatggtgtctggctctaatgggtataactctgtggctgatcgg
acatcatcaactggaagagaggatcctagttcaagaattccagatcgaacctctggtaga
acagcagcttctactcaatctgctggactttcacacagacctgctagccaggaaggccgt
tcaggaattaaatcatactctgaggatgatttgagagaaaaatctgtggctgccattcgg
gaatattatagtgcaaaagatgaaaaggaggttgcattatgtattgaggagttgaatgct
ccaagtttctatccttctgttgtgtcactttgggtaaatgattcctttgagagaaaagac
atggaaagagagttgttggctaaactttttgtcagcctttgcaatggtcgacatgatttg
ttgagcaagcgacaactcattgatggccttgcatttgttcttgcttcattggaagatact
ctaagtgatgctcctagagccactgagtaccttggacgacttcttgcgaggtttgtgcag
gaaaacatattgcccttgcaagaggtaggtagattgattcaagaaggtggagaagaacca
gggtaccttgtacgtgatggtattgcagctgatatccttggggcagttctagaggccatc
aagttaggaaaaggggattcattcttgaatgaggctaagtcaagttccaatctaaagttg
gaggatttcagaccacagcatcttaagcgatcaaaattggatgccttcatgtag
DBGET
integrated database retrieval system
