KEGG T10575: 133890653

Phragmites australis (common reed): 133890653

Entry

133890653         CDS       T10575

Name

(RefSeq) MMS19 nucleotide excision repair protein homolog

K15075

DNA repair/transcription protein MET18/MMS19

Organism

paua Phragmites australis (common reed)

Brite

KEGG Orthology (KO) [BR:paua00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:paua03036]
    133890653
   03400 DNA repair and recombination proteins [BR:paua03400]
    133890653
Chromosome and associated proteins [BR:paua03036]
Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    133890653
DNA repair and recombination proteins [BR:paua03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133890653

SSDB

Motif

Pfam:

MMS19_N MMS19_C

Other DBs

NCBI-GeneID:

133890653

NCBI-ProteinID:

XP_062187107

LinkDB

Position

14:4855224..4866279

AA seq 1141 aa
MAMAPPGEWVPHVEAYVDVSRAAAQHSASVDALAALVSKDKLTLFDLVSKMEMYLTTTDY
IVRPRGILLLGEILSRISFKWLDVNTITTLSDFFISRLSDWQAIRGALVGCLALLHRKQG
VGSIMIADVKRLVESFLQNVQVQSLAAADRKLCFQILSCILDQYPEAVKTMDGEQLYGIC
EAIDEEKDPECLKLSFHVVEAVMKLFPDPSGLAEQFASDVFEILSKYFPVYFTHGVSDEL
NATRDDLSRALMHAFCSTPYFEPVAIPLLLDKLSSSLPLAKLDSLKYLDNCIRFYGADRM
VRHASAIWFKLKEVIFNLSPDQLLLTSGSPKDAEKNKNQIVSEALNCLKTAIMYIDSSDK
DLFINLILLDKEIVNKIRSISSAEKSILSSLEDPVELHVLGSVISILAESSTYFCTRVLQ
EHFTHLVDILGASAGYESQQLDTCNGSCSTPVNYGALYLSVQMISSCREVALVSYEDYSS
VKLAKESWWLILEKKLDQLIHILGSFFTITSQSMFQQEYASCAAKGLLILATFPEHCSPL
PAKAYEDILLMLTSVVTSKYENINLWRLSLKMLSSIGSSIVEFRTSQKEVIYNRTVVNKI
IYLVEFYDTSMPLNLKLEASYEIGTAGLNYMLRVARSLEEAVVTNISEANGRVECPEHVV
HLLECYSSRVLPWLFASGGTNELALSFAMRLWDEIKDLATLNRISSHGLLDSLMIGMKLL
VGVCTEEQQSLIVQKAYGIISLVLPLPLKSMAHHTLAVDLLVPSHSIQETALVGMLSSVI
VGLRPLTPVPDMMMMINLFTVFLMKGQMPAAHALASIFNKYLHNPEFSHVNKLDKILDVI
LERCFSTVLSNSCSKISHSSADTSDDANCSDSSSGSILSKIDTLSGLAWIGKGLLMRGDE
KMKDISMFLLKCLCLDQTLASVPSRQEEHYGNDSSDTSLATSAAGAFCVMMSDSEVCLNK
KFHARMKPLYKQRFFSILMPIFLSKINESTAMKTKLALYRAFGHIISNAPVPAVITEARQ
TLLVMVDSLAKLSLDIHDKDLVYSLLLVLSGMLMDEKGKECILDNIHITISVLTQLVSYP
HMMVVRETALQCLVAFSTFPHSKIYPMRLKVLQAAIKALDDKKRAVRQEAVRCRQTWQSI
A

NT seq 3426 nt +upstreamnt +downstreamnt
atggcgatggcccctcccggcgagtgggttccccacgtagaggcctacgttgacgtctcc
cgcgccgccgcgcaacactctgccagtgtggatgcacttgcggccctggtgagcaaggac
aagctgacactctttgatttggtgtccaagatggagatgtatttgacgactacagactac
attgttcgaccaagaggaatcctgcttctgggggagatattgtctcgaatttcatttaaa
tggttagatgtcaataccatcacaacattgtcagatttctttatatcaagattgtcagat
tggcaagcaatacggggagcacttgttggttgcttggctctattgcacagaaaacaaggt
gttggtagtatcatgattgctgatgtcaaaagacttgtcgagtctttcttacagaatgtt
caagtgcaatcacttgcagctgctgaccgcaagctgtgctttcaaattctgagctgcata
ctggatcaatacccagaagctgttaaaacaatggatggtgaacagctgtacgggatctgc
gaagcaattgatgaagaaaaggacccagaatgcttgaagctttcttttcatgtagtggaa
gctgtcatgaagctatttcccgatccatctggtttggcagaacaatttgcaagtgatgtt
tttgagattctgagcaagtattttcctgtctacttcacacatggagtgagtgatgagtta
aatgctacaagggatgacctttctagagcattgatgcatgctttttgttcaacaccatat
tttgagcccgttgccatccctttgcttcttgataaactttcatcctcccttccattagca
aagcttgattctttaaaatatctggacaattgcattcgcttctatggagctgatagaatg
gttagacatgcatcagctatttggtttaagttgaaagaagttatctttaacctttctcca
gatcaacttttattaacatctgggtcgcctaaagatgcagagaagaataagaatcaaata
gtttcagaggctctgaattgtttgaagactgctattatgtatattgattcttcagataaa
gatcttttcatcaatttgatcttgttggataaggaaattgtgaataaaatccgttctata
tcaagtgcagaaaagtccattttgagttcattggaagacccggtcgaactacatgtcctt
ggaagtgtcatttctattcttgctgaatcatctacatatttctgtactagagttcttcaa
gagcattttacacacttggtcgatattttgggagcctcagctggctatgaatctcagcag
ttggatacttgtaacggatcatgttctactcctgtcaactatggagcactctatttatcc
gttcaaatgatttcatcctgtagagaagtggctttggtatcttatgaagattattcttct
gttaaattagcaaaggagtcctggtggcttatcttagagaaaaagttggatcaattaata
catatccttggatcattttttactatcacttctcaatctatgttccaacaagagtatgcc
tcatgtgctgcgaagggcttgctaatacttgcaacattcccggaacactgctcacccctg
ccggccaaagcctatgaggatattctactgatgcttacttcagtagttacaagcaagtat
gaaaatataaatttgtggaggttgtcattgaaaatgttgagtagcattggttcatctatc
gtggagttccgtacttctcaaaaggaagtgatttacaacagaactgttgttaacaagatt
atttatttggttgaattttatgatacttcaatgcctctcaacctaaaactggaagcaagt
tatgaaattggtactgctgggctgaactatatgttaagggttgctagatcactcgaagaa
gctgttgtcaccaatatttctgaggctaatggaagagtagaatgtcctgaacatgtagtc
catttacttgagtgctactctagtcgggtccttccttggttgtttgcatctggtggtacc
aatgaacttgcgttgagcttcgctatgcgtctctgggatgagattaaggacttggcaacg
ttaaatagaatcagttcgcatggcctccttgactcactaatgattggaatgaagctctta
gtcggagtctgtacagaggagcaacaatcattgattgtccagaaagcatatggcataata
tcattagtgctgccactcccactgaaatcaatggcacaccatactttggctgttgatctg
ttagttccatcacactctattcaagaaacagctcttgttggcatgctttcatcggttata
gttggccttcggcctctaacacctgtgccagatatgatgatgatgattaacctctttacg
gtttttctaatgaaaggacaaatgccagctgcacatgcattagcttctattttcaataaa
tatctacacaatccagagttctcacacgtgaataagctcgataaaatacttgatgttatt
cttgagaggtgtttctcaactgtattatccaacagctgttcaaagatatctcactcttct
gctgacacttcagatgatgctaattgctcagacagctcatccggaagcatactttctaag
attgataccttgtctggcttggcttggatcggcaaaggattgcttatgagaggagacgag
aagatgaaggacatttcaatgtttcttcttaagtgtctatgcttagatcagactttggct
agtgttccatcccgccaggaagaacattatggcaatgattcatcagatacttctcttgca
acatctgcagctggtgcattctgtgtaatgatgagtgattcagaagtctgcctaaataaa
aaatttcatgcaagaatgaagccattatataagcagcgtttcttctcaatactgatgccg
atcttcctctctaaaattaatgaatccactgcgatgaaaacaaaattggcactgtaccga
gcttttggtcatatcatttccaatgctccagtaccagcagttataacagaagcacgtcag
actttactcgtgatggttgatagcttagctaaattaagtctggatattcacgacaaggat
ctagtgtacagtttgttacttgtcttatctggaatgctgatggatgaaaaaggcaaagaa
tgcattctggacaacatccacatcaccatcagtgttcttacccaactagtttcctatcct
cacatgatggttgttcgggagacagcgttacaatgtttagtagccttttctacttttcct
cactcaaaaatttatcctatgcggctaaaggttctacaagcagcaatcaaggctcttgat
gataagaaaagggctgttcgtcaagaggctgttcgatgtcgacaaacatggcagtcgatt
gcttaa

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