Phragmites australis (common reed): 133890770
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Entry
133890770 CDS
T10575
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133890770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133890770
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133890770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
133890770
NCBI-ProteinID:
XP_062187288
LinkDB
All DBs
Position
14:complement(6849268..6855275)
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AA seq
472 aa
AA seq
DB search
MEAADYSGKLFVGGISWETDEDRLREYFARFGEVTEAVIMRDRSTGRARGFGFVVFADAG
VAERVTMDKHMIDGRMVEAKKAVPRDDHSIVSKSNGSSIGSPGPGRTRKIFVGGLPSNVT
EAEFRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEV
KRAVPKEQSPGPVARSPVGGQNYGMSRAHSFLNGFNHGYNPNPVGGYGMRVDGRFGLPTG
ARNGLTSFGPGYGMGMNIEGGTSANFGANSGFINSSNGRQIGSYYNGSSNRLANPVGYLG
LTDDSGSILSSMSRNVWGNGNLNYMSNPTNMNAFASTGIGGQGSITGDSINWGGLTSAHA
MGSISSLGSGNLGRGTGDNNFGLPSGTYGRTNSTGTIGELFSAPTNTYEVNNPDTYGSSS
IYGDTNWRFTSSEVHTPPFGHDLGNVDPDIKSDISASYMGGYNNQPSRGITS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggactactccgggaagctcttcgtcggcggcatctcctgggagacggac
gaggatcgcctccgcgagtacttcgcccggttcggggaggtcaccgaggccgtcatcatg
cgggaccgcagcaccggccgcgcccgtgggttcgggttcgtggtcttcgccgacgccggg
gtcgccgagcgggtcaccatggacaagcacatgatcgacgggcgcatggtggaggcgaag
aaagctgttcccagggacgaccacagtatcgtgagcaagagcaatggcagcagcatcggg
tcacctggaccgggccgtactagaaagatatttgttggaggtctgccctctaatgttacc
gaggctgagttcagagggtattttgagcaattcggtgtgataaccgatgtggttgtgatg
tacgaccacaacacgcagaggccgaggggctttggcttcatcacctatgattcagaagac
gcagtggataaggctctgcacaagagcttccatgagctgaatggtaaaatggttgaggtc
aagagggctgttccaaaggagcagtctcctggacctgtcgcacgttcacctgtgggaggg
cagaactatggtatgagcagggctcatagcttcctcaatggcttcaaccatggttacaac
ccgaaccccgtaggaggttatggcatgagggtggatggaaggtttggtctgcctactggt
gcacgaaatgggctcacttcatttggccctggttatggaatgggcatgaatattgaaggt
gggacaagtgcaaattttggtgcaaactctggtttcatcaatagctccaatgggcggcaa
ataggttcgtactacaatggtagttcaaacagattagctaatcctgttgggtatcttggt
cttactgatgattcaggatcaatactgagctcaatgtcaaggaatgtctggggtaatggg
aatttaaactacatgagcaaccctacaaacatgaatgctttcgcttcaactggaattggg
ggccaaggaagtattactggtgacagtattaattggggaggtctcacttctgcccatgcg
atgggtagcatttcaagccttgggtcagggaaccttggccgtggaactggagataataac
tttggtttgccttctggcacctatgggaggaccaattcaactggtacaataggcgaactg
ttttctgcaccaaccaatacatatgaagtgaacaacccagatacatatggtagcagctct
atttatggtgacacaaactggaggttcacgtcatctgaagttcacacccctccttttggt
catgatcttggaaatgttgatccagatattaaatcagatatatcagcaagttacatgggc
ggctacaataatcagccaagcagaggcatcacttcctag
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