Phragmites australis (common reed): 133890878
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Entry
133890878 CDS
T10575
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133890878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133890878
Spliceosome [BR:
paua03041
]
Common components
Common spliceosomal components
SR proteins
133890878
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
133890878
NCBI-ProteinID:
XP_062187482
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All DBs
Position
14:27554132..27558373
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AA seq
250 aa
AA seq
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MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFA
FVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERIDKGRIVEPLPRSRGRSRSR
SPRRRYRDDYRDDYRDRDYRRRSRSQSRERDGRDRYRDRDYCRRSRSHSYSPDDYRKHGR
DSLSSARKSPSRSRSLSYSPDDYKRRGKDSSASPASRSPSRTPRRKPLSPEGSPVRRNDD
RSPRSQSPST
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcttcgggcgatccggcccgccgccgatccgcgacacatactccctcctcgtc
ctcaacatcaccttccgcacgacggccgatgacctctttccgctcttcgacaagtacggc
gaggtcgtcgacatctacatccccagggaccgcaggactggcgactcgcgagggtttgcg
tttgtgaggtacaagtatgaggacgaggcgcagaaggcagttgacagactcgatgggaga
ttggtagatgggagggagatcatggtgcagtttgccaagtacggcccaaacgctgaaaga
attgataaagggagaattgtggagccacttccaaggtcaaggggccgttccagaagccgt
agtccaagacgaaggtaccgtgatgattatcgagatgactatcgggatagagattataga
aggcgaagtcgcagtcagagtagagagagagatgggcgtgacaggtacagagatagggat
tattgtcgtcgtagcaggagccacagctatagtcctgatgattacaggaagcatgggagg
gacagtttgtcttctgcacgtaaaagccctagtcgtagcagaagtctcagctacagtcct
gatgattacaagaggcgtggcaaagacagcagtgcatcccctgcaagtaggagccctagc
cgcacccctcgcagaaagccactttctcctgagggatctcctgtcaggcgcaatgatgac
cggtctccgcgttctcagagtccttcaacatga
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