Phragmites australis (common reed): 133890920
Help
Entry
133890920 CDS
T10575
Name
(RefSeq) transcription elongation factor SPT4 homolog 1-like
KO
K15171
transcription elongation factor SPT4
Organism
paua Phragmites australis (common reed)
Pathway
paua03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133890920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133890920
03019 Messenger RNA biogenesis [BR:
paua03019
]
133890920
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
133890920
RNA polymerase I system
133890920
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
133890920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
133890920
NCBI-ProteinID:
XP_062187544
LinkDB
All DBs
Position
14:complement(27559715..27562305)
Genome browser
AA seq
128 aa
AA seq
DB search
MRGGGGGMMEDDDRVGHAQIPTSFGHELRACLRCRLVKTYDQFRENGCENCPFLEMQTEH
DNVVNCTTPNFTGIISLMDPSRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGICQDNNV
QYVPPKRV
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcggcggcggcgggatgatggaggacgacgaccgggtgggccacgcgcagatc
ccgaccagcttcggccacgagctgcgcgcctgcctccgatgccgcctcgtcaagacctac
gaccagttcagggagaacggctgcgagaactgcccgttcctggagatgcagacggagcac
gacaatgtcgtcaactgtaccaccccaaactttaccggaataatctctctgatggacccc
agcaggagttgggctgctcgttggttgagaattggtaggttcattccggggtgctataca
ctggctgtctcagaggagcttccagaggagtatcaggggatctgccaagacaacaacgtt
cagtatgtgccccccaagcgggtctga
DBGET
integrated database retrieval system
