Phragmites australis (common reed): 133891286
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Entry
133891286 CDS
T10575
Name
(RefSeq) KH domain-containing protein HEN4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133891286
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133891286
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
133891286
NCBI-ProteinID:
XP_062187980
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Position
14:complement(14813880..14823926)
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AA seq
631 aa
AA seq
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MAAAKPHFSQHAAFAADDDAVAGPGFAVFRLLLPPSFSDADTMRLYAAVNPLRRFTPALQ
VRVEPLDSSPSSSSECVAVVLGPTAPVRRVEASSSSGEPLALSPAQEALVAVISAEGALH
RAEDGGRGGPGCVTCLLLVEAARLEAAAGRGTLGRIALEAGAGVRVAQWEKDGLPRGQPP
EEVVEITGDRAAVRKALVALSSCLQGNLSVGTSTMSVKKQGSMLSLASSKVPEPNMGILC
SEASTEHAQSNAPQIDYPQGVTGDVRTKSLQQISFRLLLPINLAGGLIGKKGSIIKGIED
ETGACIDVSAPLSGCTERLITISALESPDSEYHTVQSALLRIFDRMVEVESNTRLMFDKS
SQSSARVLFLKSQYGCLVGLGGSIIKEMVNATGARIQILEDTDVPACASNFELVLQITGE
LVKVRDALCLVCWKLRNHVFSSKSANYNNGYVPSSDIVESNATSHVNVSSVGQYSTDNFH
TVDHGPSLSYGVDSVDKSLSAFELSSSEVQKADNGISVGINNSDNGEWSGNGTKNSNNGV
TFPEDNSLVRGVETARITRITYETAVSGSILYLVYGDNGNNLDQLREISGADITVYDPPS
EGNEAMVVVSGPPDHAQSAQRLLVDLILQGQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcaaaaccccacttctcgcagcacgccgccttcgccgccgacgacgatgcc
gtcgcgggccccggcttcgccgtcttccgcctcctcctccctccgtccttctccgacgcc
gacaccatgcgcctctacgccgccgtcaacccgctccgccgcttcaccccggcgctgcag
gtccgcgtcgagcccctcgactcctccccatcgtcttcctccgaatgcgtcgccgtcgtc
cttggacccaccgcccccgtccgccgcgtcgaggcctcctcctcctccggggagcccctt
gcgctctcgcccgcgcaggaggccctcgtcgccgtgatcagcgccgagggggcgctccac
cgtgccgaggacgggggccgcggcgggcctgggtgcgtcacgtgcctgctcctggtcgag
gccgcacggctcgaggcggccgccgggaggggcaccctggggaggatcgccttggaggcc
ggcgccggcgtgcgcgtcgcgcagtgggagaaggacgggctgccgcgggggcagccgccc
gaggaggtcgtcgagataactggagatagggccgctgtaaggaaagctcttgttgctttg
tctagctgtcttcaaggtaatctatcagttggtacctcaacaatgtctgttaagaaacaa
ggctcaatgctatcattggcttcttctaaagtgccagagccaaatatgggaattttgtgc
tcagaagcatccaccgagcatgcacaaagcaatgcccctcagattgattatccacaaggt
gttacaggagatgttcgaactaaaagtcttcagcaaatttcatttagacttctcttgcct
atcaatcttgctggaggtttgattggcaagaagggctcgattatcaaaggaattgaagat
gaaactggtgcttgtattgatgtcagtgctcctttaagtggttgcacggagcgtttgata
acaatttcagccctagagagcccagattcggaataccacacagtgcaaagtgcactactt
cgtatatttgacagaatggtggaggtggaaagcaacacacgcttaatgtttgacaaatca
tctcagtcctcggcgagggtcctttttctcaaaagccaatatggttgtttagttggatta
ggtggttctataatcaaggaaatggtgaatgcaacaggagcaaggattcagatattggaa
gatacagatgttccagcttgtgcctccaactttgaactagttctacagatcactggggag
ttagtgaaagtcagggatgctttatgtcttgtttgctggaaattgcgtaatcatgttttc
tcctccaagagtgccaactacaacaatggttatgttccctcttcagatattgttgaatca
aatgcaaccagccatgtcaatgtttcttcagtaggccaatattcaactgacaatttccat
acagttgatcatggaccctctctcagttacggagtagactctgtggacaagtctttgagt
gccttcgagctcagttcttcagaagttcagaaagctgataatggcattagtgttggaatc
aacaattcagataatggggagtggagtggcaatggaaccaagaattcaaataatggagtt
acatttccggaggacaacagtcttgtgaggggagtcgagactgctaggataactaggatc
acatacgagactgctgtttctgggagcattttatatcttgtctatggagataatggaaac
aacctggaccagcttagagagatatctggtgcagacattaccgtgtatgatccaccgtca
gagggcaatgaagccatggtcgtggtatctggaccgcctgatcacgcacaatcagctcag
cgcctgctcgttgacttgatcctacagggacaatga
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