Phragmites australis (common reed): 133891371
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Entry
133891371 CDS
T10575
Name
(RefSeq) nuclear poly(A) polymerase 3-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133891371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133891371
Enzymes [BR:
paua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
133891371
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
133891371
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Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
MTPAP-like_central
PAP_RNA-bind
NTP_transf_2
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
133891371
NCBI-ProteinID:
XP_062188068
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All DBs
Position
14:complement(30253689..30259144)
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AA seq
547 aa
AA seq
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MSYLATATPVPWWPYAAMAPADLLAGTPASGAPEAQTLPVLLPQPPPPPAGYPPLPPRPP
IIFRPHPAFLAELDHRRSRSLVKLLKDEGAVPSPKDDKKREQVIRELKKIVMHWAKVLAY
EQSVPPRLATATVLTYGSYTLGAHGSESDIDALCVGPCIATLQYHFFVVLRQILEGRPEV
SEVQTVESAKVPLMRFRFDGIAVDLTYAHLPAIDASKAINTFSPQLLQKIDARSWRSLSG
VRVNEQIVQIVPKAENFQVLLRCVKLWARKRGLHCHHLGFFAGIHLAILAAYVCQRYPDA
SGNGLFTVFFQTFAHWPWQVPVSLHDQPTNCLRSEGQLMPIVMPCTPPEFCVSNVTKSTF
NKIRQELMRGYALTKDPLRHDFELAWLFEPFPYAAMYQHFLRIALCAPTSAELRDWAGWV
KSRFRHLILKLEKIGFECDPCPSEEVDHTVIELNIVYYWGLIPQTRMHIDTSSLKEDFMK
DVTNDVYGKVKCTRSDLTISVVGLPQLPKTMCSSHYSAYRQYMPDAALYAGLPGCTSRPE
WSWLGPG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacctggcaaccgccactcccgtcccctggtggccttacgcggcaatggcgcct
gcggacctcctcgccgggacccctgcctccggcgctccagaggcccaaaccctaccagtc
ctgctgccccagcccccgccgccgcccgcggggtaccctccccttcctccccggcccccg
atcatcttccgaccccaccccgccttcctcgccgaattggaccaccgccgcagccgttcc
ctcgtcaagctcttgaaggatgagggggccgtcccgtcgcccaaggatgacaagaagagg
gagcaggtgatccgagagctcaagaagatagtgatgcattgggcgaaggtgctggcgtat
gagcagagtgtgcccccgaggctagcgaccgctactgtcttgacatatggatcctacacg
ttaggggctcatggatctgaatctgacattgatgcactttgtgttgggccttgtatcgca
acgttgcagtaccatttctttgttgttctgagacaaattcttgagggcaggccagaagta
tcagaggtgcagactgttgaaagtgctaaggttcccttgatgcgctttagattcgatggg
attgcagttgatctcacatatgcccatctcccagctattgatgcatcaaaggctataaat
acatttagccctcaattgctacagaaaattgacgcaaggagctggaggagtttatctgga
gttcgtgttaatgaacaaattgttcagatagtaccaaaagctgagaactttcaagttttg
ttgagatgtgtcaaactatgggctagaaagagaggacttcattgtcatcatcttggcttc
tttgctgggattcatttagccatccttgcggcttatgtttgtcagagatatccggatgcc
agtggcaatggtttgttcacagtgttctttcagactttcgctcactggccttggcaagtt
ccagtaagtctgcatgatcagccaactaattgcctgcgttcagaggggcagctcatgccc
atagtgatgccttgtactccaccagagttttgtgtgtccaatgtgacaaaaagcaccttc
aataagataagacaggagcttatgcgtggttatgctttgaccaaggatccattgaggcat
gattttgagttggcttggctttttgaaccctttccatacgctgcaatgtatcaacatttt
cttcgcattgctttatgtgccccaacgtctgcagagctacgtgactgggctggatgggtg
aaatcccgcttccgccacctgattctgaagctggaaaagattggctttgagtgtgacccg
tgcccctccgaggaagttgatcatacagtcatcgagcttaacattgtctactactggggc
ctcatccctcaaacacgtatgcacattgacactagctctctgaaagaagatttcatgaaa
gatgtcaccaacgatgtctatggcaaggtgaaatgtacgcgttcggatctgacaatatct
gtggttgggttgccacagctgccaaagactatgtgcagcagccattattctgcttaccgg
cagtacatgccggatgccgcattgtatgctgggttaccaggctgcacctcaagaccggag
tggagttggctaggacctggttag
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