Phragmites australis (common reed): 133891463
Help
Entry
133891463 CDS
T10575
Name
(RefSeq) calmodulin-binding transcription activator 3-like
KO
K21596
calmodulin-binding transcription activator
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133891463
Transcription factors [BR:
paua03000
]
Eukaryotic type
Other transcription factors
Others
133891463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
IQ
Ank
TIG
Ank_3
Ank_4
RRP36
TIG_plexin
Motif
Other DBs
NCBI-GeneID:
133891463
NCBI-ProteinID:
XP_062188162
LinkDB
All DBs
Position
14:complement(27534391..27542340)
Genome browser
AA seq
1029 aa
AA seq
DB search
MAEIHNHSMSNQPPDIPQILLEAQNRWLRPTEICQILSNYKKFSIAPEPPDRPPSGSLFL
FDRKILRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGQDNENFQRRTYWL
LEEGFMNIVLVHYLEVTGGKQSFSRAKEAEEITGLSNADSPACSNSFTSQSQVASQSMDA
ESPISGQISEYEDAETDNCRASSRYHPFTEMQQPVDGIMMDNLLGASAPSASVNNPGYLG
EMRLTTANLNNHFVTHNDIASAFNETGVGLTGGPKTPPNSARFGEPFPEYPGSFMEPTLY
SSFATVESNNLDDSSHLQTFMSEALYTNNLTQKEADVLSAAGISSSQAENDSYTDRSMRY
PLLKQSSLDLFKIEPDGLKKFDSFSRWMSNELAEVVDLDIKSSSDAFWSSTETVNVADDS
SIPINEQLDAYVVSPSLSQDQLFSIIDVSPSWAFNGLKTKVLITGTFLSNKDDAENCRWS
CMFGDVEVPAEVLVDGSLRCYTPVHHSGRVPFYVTCSNRLACSEVREFEFRDSEAQYMET
SDDLHTAGINEMHLHIRLEKLLSLGSDEYEKYVLSSGSKPELIDTINSLMLDDKLSNLAL
PTDEKEFSTVRDQNLEKLVKEKLYYWLIHKIRDDGKGPNVLGKEGQGVIHLVAALGYDWA
IRPIVAAGVNVNFRDIRGWTALHWAASCGRELAVGALIANGAASGALTDPTPQFPSGRTP
ADLASENGHKGIAGFLAESALTSHLSALTLKESHGGNAEEICGLAAAEDLVESSSARLAC
VDSQAESLKDSLGAVRKSTQAAARIFQAFRMESFHRKKVIEYGDDDCGLSDEHTLSLVSL
KNAKPGQSDMPVHSAAVRIQNKFRGWKGRKEFMIIRQKIVKIQAHVRGHQVRKSYRKIVW
SVGIVEKVILRWRRKRRGLRGFQPEKQLEGPSQIQPAKVEDEYDFLKDGRKQAEGRLQRA
LARVHSMTQYPEARDQYRRLQNCVTELQESQAVQDRMLSDPTGADGGDFMAELEDLCRDD
GDTPLSTIW
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcggagattcacaatcactcgatgtccaaccagcccccagatattcctcagatactg
ctggaagctcagaaccgatggctgcggcccaccgaaatctgccaaatattgtcaaactac
aagaagttctccattgcgcccgagccaccagacagacctccaagtggttcgctgtttctg
tttgatcggaaaatattaagatacttcagaaaggatgggcacaactggagaaagaaaaag
gatggaaagacagtgaaagaagctcatgagaagctgaaagttggcagtgttgatgtactt
cattgttattatgcccatgggcaggataatgagaacttccaaagacggacctattggctg
ctagaagagggtttcatgaatattgttcttgttcactaccttgaagtcacgggtggcaaa
caaagtttcagtcgtgctaaagaagctgaagagattacaggattatctaatgctgatagt
cctgcatgttcaaactctttcactagtcagagccaggtagcctcccaatctatggatgct
gaaagcccaattagtggacagatttcggaatatgaagatgctgaaacagataattgtcga
gcgagctccagataccaccctttcactgagatgcagcagcctgtggatgggatcatgatg
gataacttattgggtgcttcagctccaagtgcttctgtaaataatccaggttatcttggt
gaaatgcggcttaccacagctaacttaaacaatcattttgtcactcacaatgacatagct
agtgcattcaacgaaactggagtagggttaactggcggtcccaaaactccacccaattca
gcgcggtttggtgaaccctttccagaatatccaggtagcttcatggagccaacactctat
tcttcttttgccaccgtggagtccaacaatctggatgatagttcgcacttgcaaacattt
atgtctgaggcactctacaccaacaacctcactcaaaaggaagctgatgtgctgagtgct
gcaggcatatcgtcctctcaggcagagaatgatagttataccgatcgaagtatgagatat
ccacttttgaagcagtcatcattagatctctttaagattgagccagatggtttgaagaaa
ttcgacagcttctcaaggtggatgagcaacgaacttgcagaggttgttgatttggatatc
aaatccagttctgatgctttctggagtagtactgaaactgtgaatgttgctgatgactct
agtatacctatcaacgagcagttagatgcatatgtagtcagcccttcactttctcaagac
cagctcttcagcattattgatgtatctccaagctgggcatttaatggcttgaagactaag
gtcttaattactggtacattcttgtcaaacaaagatgatgcggaaaattgcaggtggtca
tgtatgttcggggatgttgaagtacctgctgaagttttagtagatggatccttgcgctgc
tatacgccagtgcatcattctggacgagttccgttttatgtgacatgttcaaatagatta
gcttgtagtgaagtgcgagaatttgagttccgtgattctgaggcccagtatatggagact
tcagatgatctgcatactgctggcataaatgaaatgcatttacatatccgtcttgagaag
ttactttccttgggatcagatgaatatgagaagtatgttttgagtagtggaagtaagcct
gagttgatcgacactattaattccttaatgcttgatgataaattgtccaacctggcattg
ccaactgatgagaaagaattttccactgtacgggatcaaaatcttgagaaactggtgaaa
gaaaagctgtattattggctcatccataagatacgtgatgatggaaaaggtccgaatgtt
ctaggcaaagaaggacaaggcgtgattcatttagtagctgcacttggctatgattgggct
ataagaccaatagttgctgcaggcgtaaatgttaacttcagggatattcgtggatggact
gcgcttcactgggctgcatcttgtggaagggagctggcagttggtgccctgatagcaaat
ggagctgcatctggtgctttgactgatccaacaccacaattcccatctggaagaacacct
gctgatttagcatcagaaaacggacacaaaggcattgccggttttcttgcagagtctgct
ttgacaagtcacctttcagcacttacactaaaagaatcacatggtggcaatgcagaagaa
atatgtggattagcagcagctgaagatcttgtagaatcaagttctgctcggcttgcttgt
gtggattctcaggcagagtcattaaaagattcacttggtgcggttcgtaaatcaactcaa
gctgcagccagaatatttcaagcttttaggatggaatctttccacagaaagaaagtaatt
gaatatggagatgatgactgtggattatctgatgaacacacgctttcgcttgtttctctt
aaaaatgcgaaacctggacagagtgatatgcctgtgcattctgctgcagttcgtatccaa
aacaagtttagaggatggaaaggaaggaaggagttcatgattatccgacagaaaattgta
aagatacaggcccatgtacgtggacatcaagtaaggaaaagctataggaagatagtctgg
tctgtaggcatcgtggagaaagtcatactgaggtggaggagaaagagaaggggcctgcga
ggtttccaacctgagaaacaactcgaaggtccatcgcagatccaacctgcaaaggttgag
gacgaatatgatttcttgaaggacggcaggaaacaggctgaaggcaggctacaaagagca
cttgctcgtgtgcattccatgactcagtatccggaagcaagggaccaataccgtaggctg
caaaactgtgttaccgaactgcaggagtcccaggcggtgcaggataggatgcttagcgat
ccaactggcgcggatggaggcgatttcatggctgaactggaggacctatgccgggacgat
ggcgacacacctttgtccactatttggtga
DBGET
integrated database retrieval system
