Phragmites australis (common reed): 133891487
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Entry
133891487 CDS
T10575
Name
(RefSeq) nuclear pore complex protein NUP54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133891487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133891487
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133891487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
133891487
NCBI-ProteinID:
XP_062188189
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Position
14:complement(11542071..11547717)
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AA seq
405 aa
AA seq
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MFGTPTSSPLFGTPSSAPAFGTPSPTPVFGTPSSTPAFGAPSLTPTFGTPPSAPAFGTPS
STPAFVTPSSTPAFSGLTSTPAFSGLTSTTGFGTPSSTPAFGATPSPSPFGFQQQATPSP
SPIGLLGGGGGQITTQMAPVAPLPLSPSDRDIQAIVDAYKEDPGNPRYAFRHLLFSVTEP
SRRVKPVAASDIMWTEAMGKLECMDSADRERLWPQLVQGFKDLSCRLKLQDEVLISDTER
LSMTHSNVKMLRRHFQADTYPWIQRLKQQELVLQRRLLRFMRIVEALENRGYRGPLTKEE
SDLYERLVAILKRLKGPNADLSKRVNTLLSTSRLLASTGGAGGPIYIPSSAKVDERSVTE
LLEALQLQTEAVAKLGNVLKRNIRDLEIMQSEDTDMAEDSVGRMH
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggacccccacatcctccccactcttcggtaccccgtcctccgcgcccgccttc
gggacgccctccccaacccccgtattcggcacgccctcctccacccctgcattcggcgcg
ccgtcgttgaccccgaccttcggcacccccccgtcggcgcccgcattcgggaccccgtcg
tcgaccccggctttcgtgacgccttcctcgacccctgcgttcagcgggctgacctcgacc
ccggctttcagcgggctgacgtcgaccacgggttttgggacaccctcttcgacgccggcg
ttcggcgcgacgccttcgccctcaccctttggattccagcagcaggcgacaccgtcccct
tcgccgatcggcttacttggaggaggcggcgggcagatcaccacccagatggcccccgtc
gcgccgctgccgctttccccctccgaccgcgacatccaggctatcgtggatgcgtacaag
gaggaccccgggaacccccgttatgcttttaggcatctgttgttcagcgtgacagagcct
tcgcgaagggtgaagccagttgctgcatctgatattatgtggacggaagcaatggggaag
ctcgaatgcatggatagtgcggatagggagaggctgtggcctcaacttgtgcaggggttt
aaagatctttcctgccggcttaagcttcaagatgaagtccttatttcagatactgaaaga
ttgagcatgacccactctaatgttaaaatgctgcgaaggcatttccaagctgacacatat
ccttggattcaacggttgaagcagcaagaactggttcttcaaagacgccttttaaggttc
atgagaatagtggaggcattggagaatcgaggttaccgcggtcctttaacgaaggaggaa
tctgacttatatgaaagattggttgctatattaaagaggctaaaaggacctaatgctgat
ctgtctaagagagttaatactcttctgtcgacatcacgtcttctggctagcactggtggt
gctggtggtcccatctatattcctagttcggccaaagttgatgaacggagtgttacagag
cttcttgaggccttacaactacaaacggaggctgttgccaagttgggtaatgtgttgaag
aggaatatcagagaccttgaaatcatgcaatcagaagacacggatatggctgaagacagc
gttgggagaatgcactaa
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