Phragmites australis (common reed): 133891701
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Entry
133891701 CDS
T10575
Name
(RefSeq) protein SHORT-ROOT 1-like
KO
K27743
protein SHORT-ROOT
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133891701
Transcription factors [BR:
paua03000
]
Eukaryotic type
Other transcription factors
GRAS
133891701
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Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
133891701
NCBI-ProteinID:
XP_062188418
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Position
14:25545942..25548555
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AA seq
576 aa
AA seq
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MDTLFRLVSLQASEQQQSASYNSRSTTSSGSRSSSHQTNASYNYYYHSNSGGGGGGPYYY
GQHHHQQYYLEPYQEECGNAHHLYMDDDFSSSSSSRQHFQSHGATVQPPTSSTPTPTAPT
PPLSTSSTAAGAAHALFEAADLSFPPDLSLDFSSPASSAAVGGGGGGRWASQLLLECARA
VAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLAAASDRN
TSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAASSETQRFQILDLSNTFCTQ
WPTLLEALATRSADDTPHLSITTVVSAAPSTPTAAVERVMREIGQRMEKFARLMGVPFSF
RAVHHAGDLAELDLDALDLRDGGSTTALAVNCVNSLRGVVPGGAHRRDAFAASLRRLDPR
VVTVVEEEADLVASNLDASEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLA
LERRAGRAIVDLVSCPASESIERRETAASWARRMQSAGFSPVAFSEDVADDVRSLLRRYR
EGWSMRETGLDDSTAGAGVFLAWKEQPLVWASAWRP
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggatacgttgtttaggttggttagcctccaagcctctgagcagcagcagtcggcttca
tacaactcgaggagcaccacgtcgagcggctcgaggtcgtcgtcgcaccagaccaacgcc
tcctacaactactactaccacagcaacagcggcggcggcggcggcgggccgtactactac
ggccagcaccaccaccagcagtactacctggagccgtaccaagaagaatgcggcaacgcc
caccacctttacatggatgatgacttctcttcctcgtcttcgtcgaggcagcacttccag
tcgcacggcgcgacggtgcagcccccgacgtcgtccacgcccacgcccacggccccgaca
cccccgctgtccacatcgtccacggccgcgggggcggctcacgcgctgttcgaggcggcc
gacctgtcgttcccgccggacctcagcctcgacttctcgtccccggcgtcgtcggcggcg
gtggggggaggaggcggggggagatgggcgagtcagctgctgctggagtgcgcgcgagcg
gtggccgcgcgcgacagccagcgcgtgcagcagctgatgtggatgctcaacgagctggcg
tcgccgtatggcgacgtggagcagaagctggcgtcctacttcctgcaggggctcttcgcg
cggctcacggcgtccgggccgcggacgctgcgcacgctcgcggcggcgtccgaccggaac
acgtcgttcgactcgacgcggcgcacggcgctgcggttccaggagcttagcccgtggtcg
tcattcgggcacgtggccgccaacggggccatcctggagtcattcctggaggccgccgcg
gcgtcgtcggagacgcagaggttccaaatcctcgatctgagcaacacgttctgcacgcag
tggcccacgctgctcgaggcgctggcgacgcggtccgccgacgacacgccacacctgtcg
atcaccaccgtggtttccgccgcgccgtccacgccgacagccgccgtggagcgcgtgatg
cgggagatcgggcagaggatggagaagttcgcgcggctgatgggcgtgcccttcagcttc
cgcgccgtgcaccacgccggggacctcgcggagctcgacctcgacgcgctggacctgcgc
gacggcggctccaccaccgctctcgccgtcaactgtgtcaactcgctgcgaggcgttgtt
ccgggcggtgctcaccggagagacgcgttcgcagcgtccctccgccgtctcgacccgcgg
gtcgtcaccgtcgtcgaggaggaggccgatctcgtggcttccaaccttgacgcatccgag
gaaggcggcgacacggaggcagcattcttgaaggtgttcggagagggcttgcggttcttc
tcggcctacatggattcccttgaagagagcttcccgaagactagcaacgaaaggctggca
ttggagaggagagcgggacgtgccattgtcgacttggtctcctgcccggcgtcggagtcc
atagagcgacgggagacggcggcgtcatgggcgcgccgcatgcagtcggccgggttctct
ccggtggcattcagcgaggacgttgccgacgacgtgcggtcgctgctgcgccggtaccga
gagggctggtcgatgcgcgagacaggcttagacgactcgacggccggagcaggcgtcttc
ctcgcgtggaaggagcagcctctcgtgtgggcaagcgcgtggaggccatga
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