Phragmites australis (common reed): 133891954
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Entry
133891954 CDS
T10575
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-2-like
KO
K03265
peptide chain release factor subunit 1
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133891954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133891954
03012 Translation factors [BR:
paua03012
]
133891954
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
133891954
Translation factors [BR:
paua03012
]
Eukaryotic type
Release factors
133891954
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
133891954
NCBI-ProteinID:
XP_062188658
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Position
15:5181973..5185966
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AA seq
437 aa
AA seq
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MSDSHETDRNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQVARVAKMLGDEYGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPSNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN
VSLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDINRYLLKNSVSGETVIKHLNKEQEADQSNFRD
PSTNAELEVQEKLSLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDI
RSFDELSDDEGLYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagccatgagaccgataggaacattgagatttggaagattaagaagctaatc
aaggctctggagtcagctagaggcaatggcacgagcatgatctctcttattatgccacca
cgtgaccaggttgctcgagtggcgaagatgttaggtgatgaatacggtactgcttcaaac
atcaagagtagggtcaatcgtcaatctgtgttggctgccatcacctcagctcagcagagg
ctgaagctctataacaaagtcccttcaaatggtttggttctctacactggaaccattgtt
actgatgatggaaaggaaaagaaggtaactattgattttgagcccttcaagcctattaat
gtgtcactgtacctttgtgacaacaagttccacactgaggctttgaatgagctcttggaa
tccgatgacaagtttggattcattgtcatggatggtaatggtactctttttggcacacta
agtggcaacactcgagaagtgcttcacaaattcactgttgatctcccaaagaagcatggt
agaggaggacagtctgctctgcgttttgctcggcttcggatggagaaacgccataactat
gtccgcaaaacagctgagcttgccactcagttcttcattaatccggctacgagtcagcct
aatgttgcagggctgattcttgctggttctgctgattttaagacagagttgagccaatct
gacatgtttgatcagcgacttcaagccaagatacttaatgtggttgatgtttcttatgga
ggtgagaatggttttaaccaagctattgagttgtcagctgagatcctagcaaatgtgaag
ttcatacaagagaagaagttgattggcaagtatttcgaagagatcagtcaagatactggg
aaatatgtctttggtgttgatgacaccctgaaggctcttgaaatgggtgctgtggagacc
ctgattgtgtgggagaatctggatatcaacaggtatctgctcaagaacagtgtctccggg
gaaactgttataaaacatctgaacaaggagcaggaagctgatcagagtaatttccgtgat
ccatccactaacgctgagctggaagttcaggaaaagctgtctctgttggaatggtttgct
aatgagtacaagaagtttggttgctctctcgaatttgtcactaacaaatctcaagaggga
tcacagttctgtagaggatttggtggcattggtggtatgttgcgctaccagctggatatc
cggtcttttgatgagctttccgacgatgagggtttgtacgaagattctgactag
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