Phragmites australis (common reed): 133891973
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Entry
133891973 CDS
T10575
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00040
Pentose and glucuronate interconversions
paua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133891973
Enzymes [BR:
paua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
133891973
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
133891973
NCBI-ProteinID:
XP_062188688
LinkDB
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Position
15:complement(90612..92635)
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AA seq
387 aa
AA seq
DB search
MGLASCFSRLLCSSCCSTSSSNPNPNPCPRPRIQDMDPPPPPPQEQQQQQQPPHGHGGGG
MPYPDVDCRLRALAGRAEGFGRHAIGGLHGAIYHVTSLQDDGCGSLREACRMEEPLWIVF
EVSGTIHLRSYLRVSSYKTIDGRGQRVVLTGKGLQLRDCHHVIVCNLLFEGGRGHDVDAI
QIKPSSTNIWIDRCTLADYDDGLIDITRQSADVTVSRCHFARHDKTMLIGADPTHVGDRC
IRVTIHHCFFDGTRQRHPRLRFGKVHLYNNYTRDWGIYAVCASVEAQIVSQCNIYEAGIQ
KKTVFKYMPEKAGDRDDVVAGWIRSEGDAFLNGALPCLIDGPGVEGVFRPQDYYQQWTME
PASPALKELLQLCAGWQPVPRPPDDCC
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgggcttagcctcctgcttctcccgactcctctgctcctcctgctgcagcacctcctct
tccaaccccaatcccaatccctgcccccgcccccgcatccaggacatggaccctccacct
cctcctccgcaggagcagcagcagcagcagcagcctcctcatggtcatggcggcggaggg
atgccgtaccccgacgttgactgcaggctccgcgctctcgccggccgcgccgagggcttc
ggccgccatgccatcggaggcctccacggggccatctaccatgtcacatccctgcaagat
gacgggtgcgggagcctcagggaggcgtgccgcatggaggagcccctttggatcgtcttc
gaggtctccggcaccatccacctccgctcctacctccgcgtctcctcctacaagaccatc
gacggccgcggccagcgcgtggtgctcaccggcaagggactccagctcagggactgccac
cacgtcatcgtctgtaacctgctcttcgagggcggacgcggccacgacgtggacgccatc
cagatcaagcccagctccaccaacatctggattgaccgatgcacgctcgccgactacgac
gacgggcttatcgacatcacgcgacagagcgcagacgtcacagtctccagatgccacttt
gcgcggcacgacaagacgatgctcatcggcgccgaccccacgcacgtcggcgaccgctgc
atcagggtcaccatccaccactgcttcttcgacggcacgcgccagaggcacccgcgcctg
cgcttcggcaaggtccacctctacaacaactacaccagggattggggaatctacgccgtc
tgcgcaagcgtcgaggcccagattgtgtcccagtgcaacatctacgaggcaggaatccaa
aagaagacggtgttcaagtacatgccggagaaggccggcgaccgagacgacgtggtggcc
ggatggatcaggtcggaaggggacgcctttctcaacggcgcgctgccctgcttgatcgac
ggcccaggggtagaaggcgtcttcaggccacaggactactaccagcaatggaccatggag
ccagcgtcgccggcgctcaaggagctcctgcagctctgcgctggatggcaacccgtgcca
aggccccccgacgattgctgctaa
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