Phragmites australis (common reed): 133891988
Help
Entry
133891988 CDS
T10575
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 4-like isoform X1
KO
K19892
glucan endo-1,3-beta-glucosidase 4 [EC:
3.2.1.39
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00500
Starch and sucrose metabolism
paua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
133891988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
paua00537
]
133891988
Enzymes [BR:
paua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
133891988
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
paua00537
]
Enzymes
133891988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
133891988
NCBI-ProteinID:
XP_062188705
LinkDB
All DBs
Position
15:complement(5835590..5845499)
Genome browser
AA seq
492 aa
AA seq
DB search
MSPKRLQGLAMLLMLMVFNVSGAFVGVNIGTDMSNLPSATDIVSILKAKKIQHVRLLDSD
HQMLTALANTGIEVMIGVPNDQLLRVGQSPSTAADWINKNVAAYIPATNITYIAVGNEVL
TTIPNAALVLVPALQFLQSALLAANLNTEVKISSPHSMDMISKAFPPSTATFNSTWSSIM
FQYLQFLKNAGSSFMLNAQPYYGYVKGQGVFPLEYALFRSLSPNSQIADPNTNLFYTNMF
DAMIDATYNSIQAMNFSGIPVLVTASGWPWLGGPNEKAANVDNALAYNTNLIRHVLNNSG
TPSLPNNQSSTYIFELFNEDLRAGPVSEKNWGIMFPNATTVYSLSFEDVTTTIPESPALR
GMFCVANSSAPHSALKHSLDWACGPGSANCSAIQPGQPCYESDDIVAVASYAFNDYYHRA
QASGGTCNFNGTAMITSTDPSHGSCIFAGSTGSNSSRGGAASGPVSPDGFATKSQSCWLT
HLIAALLPILVL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccaagagactacagggcttggctatgctgttaatgctcatggttttcaatgtt
tcaggagcatttgtcggtgtcaatattgggactgacatgtcgaacctaccatcagcaaca
gatatagtgtctatccttaaagcaaagaagattcagcatgttcgcctgcttgactcagac
catcagatgttgactgcccttgcaaatactggaatagaagtgatgattggggttccaaat
gatcagctacttcgtgtggggcaatctccttctacagctgctgattggattaacaagaat
gttgctgcttacattccggcgactaacatcacatatattgcagttggtaatgaggttctt
actactattccaaatgcagcccttgttctcgtacccgcattgcaattcctccagtctgca
ctgttggctgcaaacctcaatactgaggtgaaaatttcaagtcctcattctatggatatg
atctcgaaggcgtttcctccctcaactgccactttcaattcaacttggagctcaataatg
tttcagtatcttcaatttctgaagaatgcaggatcttccttcatgctgaatgcccaacca
tattatggctatgtcaaagggcaaggcgtcttccccttagagtatgcattgttccgctca
ctcagtcccaatagtcaaattgcagatcccaataccaatctgttctataccaatatgttt
gatgcaatgattgatgctacttacaactcaattcaagcaatgaatttctcggggattcct
gttttggtcacagcttctggctggccatggcttggtgggccaaatgagaaggctgctaat
gttgataatgctttggcctataatacaaacctcatacgtcatgtactgaataattccggt
acacccagcctaccaaataaccagtcgagcacctacatctttgagttgttcaatgaggat
cttcgggcagggcctgtatcagagaaaaattgggggattatgtttcccaatgcaaccact
gtgtactctttgtcatttgaggacgtgaccacaactattccggaatcaccagctttgcgt
gggatgttttgtgtggcaaattcaagtgcaccccatagtgcacttaagcatagtttggat
tgggcatgtggccctggctctgcaaactgcagtgcaattcagcctgggcaaccatgctat
gaatcagatgacattgtagctgttgcttcttacgctttcaacgattattaccatagagca
caagctagtggtggtacatgcaactttaatggcactgcaatgataacatccactgatcca
agccatggttcatgcatttttgctggaagcaccggttccaatagcagccgtggtggtgca
gcttccggtcctgtaagcccggacggttttgctacaaaatcgcaatcttgctggttgact
cacctaattgccgcattgctgcccattctggtcctgtaa
DBGET
integrated database retrieval system
