KEGG   Phragmites australis (common reed): 133892047
Entry
133892047         CDS       T10575                                 
Name
(RefSeq) glycine-rich cell wall structural protein 1.0-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133892047
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133892047
   03041 Spliceosome [BR:paua03041]
    133892047
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133892047
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133892047
Spliceosome [BR:paua03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133892047
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 133892047
NCBI-ProteinID: XP_062188770
LinkDB
Position
15:4490541..4493626
AA seq 377 aa
MAFASRIGNVLKRTSVSSNSPLFQAVRCMSSSKLFVGGLSYATDDTTLKDAFSQYGDVLE
ARIIIDRDSGRSRGFGFITYSSSEEAAAAITAMDGKDLQGRTLKVNHANDRAGGIRGGGV
FGSGYGGGGGYATGGYGSGGGYGAGGHGGGSGYGVGGHGGGSGYGAGGGGGGGSGYGAGT
YGSSSGGYAGNGSGYGGTYGSSSGGYAGNGSYSDRATGGGYASNYNNASSGEYTGNGGYG
DGATGSGYVSNYKNTSGGGYAGNGSYGTSGNSDGNSGGYNAPNTYGAGKCNTGAAGGGTF
GEIGGGFSGGGFSAAGRNNDNNFAGNATGGSYNGSGGAGEFSGGQAMGYGANKVQYNGQD
DLLGEDFFDDKKAAEHR
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggctttcgctagtagaattggaaacgtgcttaagagaacttcagtgtcctcgaattcg
ccgttgtttcaggcagtaagatgcatgtcttcttcaaagctttttgttggaggactctca
tatgccacagatgacaccactctgaaggatgccttttcgcagtatggggatgtccttgaa
gctcgaatcatcattgaccgggactctgggaggtcaaggggatttggatttataacttat
tcatccagcgaagaagccgcagctgcaattactgccatggatggcaaggaccttcaagga
cgaactttaaaggtgaaccatgccaatgaccgtgctggcggaatacgcggaggtggtgtg
ttcggctctggttatggtggtggaggtggatatgctactggtgggtatggcagtggcggt
ggatatggtgctggcgggcacggcggtggcagtggatatggtgttggcgggcatggcggt
ggcagtggatatggtgctggcggtggcggtggcggtggcagtggatatggtgctggcacg
tatggcagtagcagtggtggatatgccggcaatggcagtggatatggtggcacgtatggc
agtagcagtggtggatatgccggcaatggcagttacagtgatagagctactggtggtggt
tatgctagcaactacaacaatgcttctagtggcgaatataccggcaatggtggttacggt
gatggagctactggtagtggttatgttagcaactacaagaatacttctggtggcggatat
gctggcaatggaagctatggtacctccggcaattctgatggaaactctggtgggtataat
gctcccaacacctatggtgcagggaagtgcaacactggagctgccggtggtggaaccttt
ggtgaaatcggtggcggcttcagcggtggaggtttcagtgctgctggtcgcaacaacgac
aacaactttgctggaaatgcgaccggcggaagctacaatggcagtggcggtgctggtgaa
ttttctggtggccaggccatgggctatggggctaacaaggttcagtataatggccaagac
gacctgttgggggaagacttctttgacgataagaaagcagcagaacatagataa

DBGET integrated database retrieval system