Phragmites australis (common reed): 133892149
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Entry
133892149 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133892149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133892149
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133892149
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133892149
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
133892149
NCBI-ProteinID:
XP_062188859
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All DBs
Position
2:512407..515504
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AA seq
316 aa
AA seq
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MDVGSIECVSLPDAAPTDVDAAGPGLGTLLAAAAAASRAYAKGSSAGGVHELLECPVCTN
SMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGC
QEIFPYYSKIKHEAQCSFRPYNCPYAGSECAAAGDIPYLVSHLRDVHKVDMHSGCTFNHR
YVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEAKNYSYS
LEVGANGRKMVWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRITGRIW
KEQQTPDDACIPNLSS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcagcatcgagtgcgtctcgctccccgacgccgccccaacggacgtggac
gccgccggccccggcctcggcacgctcctcgctgcagccgccgccgcctcccgggcctac
gctaagggcagcagcgcgggcggcgtgcacgagctgctcgagtgccccgtctgcaccaac
tccatgttcccgccgatccaccagtgccaaaatggacatacattgtgttccacatgcaag
gctagagtacacaatcgttgccctacgtgcagacaagagcttggtgatatcaggtgtttg
gcactggagaaagtagccgagtcgcttgagcttccctgtaagtactgctctctggggtgc
caagaaatcttcccatactacagcaagataaaacacgaagcgcagtgcagctttagacca
tataattgcccctacgctggctcagagtgtgccgcggctggtgatatcccttatcttgtt
tcccatttgagggatgttcacaaagttgatatgcatagtggctgcacattcaaccacaga
tacgtcaaatcgaacccacgagaagttgaaaatgccacctggatgctgacggtgtttcat
tgttttgggcagtacttctgcctgcactttgaggccttccagcttgggatggcaccagta
tacatggccttcctccgtttcatgggggacgagaatgaggcgaagaactacagctacagc
cttgaggtgggtgccaatggcaggaagatggtatgggagggcacccccaggagcgtccgc
gacagccaccggaaggtgcgggacagccacgacggcctcatcatccagaggaacatggcg
ctgttcttctcggggggtgaccggaaggagctgaagctcaggattaccggccggatctgg
aaagagcagcagaccccagacgacgcctgtatacccaatctcagtagctaa
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