Phragmites australis (common reed): 133892351
Help
Entry
133892351 CDS
T10575
Name
(RefSeq) histone deacetylase 15 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133892351
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133892351
04131 Membrane trafficking [BR:
paua04131
]
133892351
03036 Chromosome and associated proteins [BR:
paua03036
]
133892351
Enzymes [BR:
paua01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
133892351
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133892351
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133892351
Membrane trafficking [BR:
paua04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
133892351
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
133892351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
133892351
NCBI-ProteinID:
XP_062189049
LinkDB
All DBs
Position
15:complement(27456538..27466540)
Genome browser
AA seq
637 aa
AA seq
DB search
MASDMRPLSGKKVEIPSRGLENCVVSDQACHGKCESCDGDGKSSCAGANAISSLIESHNE
GKASKENSGACSFNCDHADAIVEEVRRSIARSGHVESADRDVCLDGKSGSCMAGDDLPQE
SEREQAGGTVDDLFFFNDEEEDDSDWEPTTHLVVNRWFCLNCTVPNMDELAYCLNCHELK
GSDVAGYDVFKTQIAEAALVSADKELQASTAIGFDERMLLHCEIEVKPNPHPERPDRIRA
IAASLAAAGVFPSKCALVPPREITKEELLMVHTPDHIESVEQTKNMLYSYFTSDTYANGH
SACAAKLAAGLCADLASLIISGCVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQ
RAGAKKVLIVDWFSQLLLQDVHHGNGTQEIFEGDKSVLYISLHRHEDGNFYPGTGAAHEV
GIRDGQGFSVNVPWSRGGVGDNDYIFAFQNIVLPIAAEFAPDITIISAGFDAARGDPLGC
CDVTPAGYSRMTSMLTACSEGRLLVILEGGYNLRSISSSATEVVKVLVGDGPSFDAVATA
PSKEGLKTVLKVLKIQQQFWPVLGPTYASLQEQQGSVFSKYTYKGNELKKRKHLGGPGPF
WWKSGSKRLLYEALFEGRRLRKIKVTGKGKAVDTAEP
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgatatgagaccacttagtggcaaaaaggttgagataccctcccgtggcctt
gagaactgtgtagtttctgatcaagcttgtcatggcaaatgcgaaagctgtgacggtgat
ggaaaatcgtcttgtgctggagcgaatgccatttcctcgttgattgagagtcataatgag
gggaaggcttcgaaagagaactctggagcctgcagttttaactgtgatcatgctgatgct
atagtagaagaggttagacgttctatagcaaggtcagggcatgttgagagcgctgaccgt
gatgtctgtctggatggcaaaagtgggagctgcatggctggtgatgatctaccacaagag
tctgagagagaacaagctgggggcacagtggacgatctttttttctttaatgacgaagag
gaagatgacagtgactgggaacccactactcaccttgttgtgaataggtggttttgcttg
aactgcacagtgccaaacatggacgagcttgcatattgcctgaattgccatgagcttaag
ggatctgatgtagctggatatgatgttttcaaaactcaaattgcagaggcagctttggta
tctgctgacaaagaattgcaggcatctacggcgattggttttgacgaaagaatgctgctc
cactgtgagatagaagttaagccaaatccacatccagaaagaccagaccgcattcgcgca
attgctgctagtcttgctgctgcaggagtctttccctcaaaatgtgctttggtacctcct
cgagaaatcaccaaggaggaactcctaatggtccatactccagaccacatcgaaagtgtc
gagcagacaaagaacatgctttacagttatttcacttcggatacttatgcaaatgggcac
tcagcatgtgccgccaaacttgcagcaggactatgtgctgatcttgctagcttgataata
tccgggtgtgttcgcaatggcttcgcaatggtgagacctcctgggcatcatgcaggggtg
aagcaagcaatgggtttttgtcttcacaacaatgcagcagtggctgcattagctgcacaa
agagcaggtgccaagaaagtcctcatagttgattggttttctcaattattattgcaggat
gtgcaccatggaaatggaacacaagagatatttgaaggggataaatcagtcttgtacata
tcgttacatcgtcatgaggatggaaacttctaccctggaactggagcagcacatgaggtg
ggaattcgtgatggtcaaggattctcagttaatgtaccttggagccgtggtggtgttgga
gacaatgactacatctttgcttttcagaacattgtgcttccaatagctgcagaatttgcc
cccgacatcactataatatctgcaggattcgatgcagctagaggtgaccctctgggttgt
tgtgatgtcactccagctggatactctaggatgacatccatgttaactgcttgctctgag
ggaagattgttggtgatacttgagggaggatacaatcttcggtcgatatcctcatcagct
actgaagttgttaaggtcctagttggggacggtccaagttttgatgcagttgcaactgca
ccatcaaaggagggcttgaagactgttttaaaagtcctgaagattcagcaacaattttgg
ccagttttaggtccaacctatgcatcactgcaggaacagcaggggtcggttttttccaaa
tatacttacaaaggaaacgagttgaagaaaaggaagcatttaggaggaccagggcccttc
tggtggaagtcgggaagtaaaaggcttctgtacgaagcgctattcgagggccgccgtctg
agaaagatcaaggtgacagggaaaggaaaagcagttgatacagcagaaccttag
DBGET
integrated database retrieval system
