Phragmites australis (common reed): 133892422
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Entry
133892422 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133892422
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133892422
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133892422
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-Nse
RING_XB3-XBAT31
zf-C3HC4_4
DUF4302
Motif
Other DBs
NCBI-GeneID:
133892422
NCBI-ProteinID:
XP_062189164
LinkDB
All DBs
Position
15:27602479..27606283
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AA seq
371 aa
AA seq
DB search
MTMDEKAQMEKLSSAAAFVEGGVQDACDDACSICLEAFSDSDPSAVTRCNHEFHLQCILE
WCQRSSQCPMCWQAICMKDPMSQELLEAVEQERNLQENRARTTTVVRHPLLGDFEVPVGV
DDAEFEERIIQHLAAASAIRRSHRHVRREGRRSRSAAYGHPQILIFSSTEGTSGHSISSN
SRQEGKNEHSPAVISARPFPTVAATEETAADTSVHDTTLVNAPAGSNNRYFLRKRVSRNQ
SSPVSQDGAGPSDLQSFSDTLKSRLQSVSTMYKDSITKSTRGWKERWFTQNNTISNLGSE
VRREVNAGIAAVSRMMERLETRDGTGPSSTSPTNIHSASDTNNQGAVPSKIATVVNDTSS
SATCVSRSGSQ
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggacgagaaggcgcagatggagaagctctcgtcggcggcggcgttcgtggag
ggcggcgtccaggacgcctgcgacgacgcctgcagcatctgcctcgaggccttctccgac
agcgacccctccgcggtgacccgctgcaatcacgagttccacctccagtgcatccttgaa
tggtgccagagaagctcccagtgtcccatgtgttggcaggcaatctgcatgaaggaccct
atgagccaagagctccttgaggctgttgaacaagagaggaatttgcaagaaaaccgtgca
cgcacaacaacagttgttcgtcatccactgctcggagattttgaggtaccggttggtgtg
gatgatgctgaatttgaggaacgtattatacaacatctggctgctgcttctgcaattcgt
aggtcgcaccggcatgttagaagagagggtcgccgcagcagatcggcagcatatggtcac
ccacaaattctaatcttttcaagtaccgagggcacttctggccattccatttcttcaaat
tcacggcaagaagggaagaatgaacattctcctgctgtaatttctgctcgcccatttcct
actgtggctgctacagaagaaacagctgcagacacatctgtgcatgatactactttggtt
aatgcccctgctgggtcaaataataggtatttcctgcggaaaagagtttctaggaatcaa
tcttcgcctgtcagccaagatggagctggaccatctgacttgcagtcattctcagacaca
ctcaaatctcgcctgcaatcagtttcaacaatgtacaaagattctataacaaaaagtaca
cgtgggtggaaggaaaggtggttcacccagaataatactatatcaaatcttggttcggag
gtgaggagggaggtcaatgctggaattgctgctgtatctcgtatgatggagcgattggaa
acacgggatggaacaggaccatcatctacttctccaaccaatatccattctgcttcagat
acaaataatcaaggagctgtaccttcaaaaattgctactgttgtaaatgacacctcgtct
tcagcaacttgcgtgtcaagatcaggttctcaatga
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