Phragmites australis (common reed): 133892439
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Entry
133892439 CDS
T10575
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133892439
Membrane trafficking [BR:
paua04131
]
Autophagy
Other autophagy associated proteins
Others
133892439
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
WD40
Beta-prop_WDR5
BCAS3_WD40
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
CFAP251_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_RSE1_2nd
Beta-prop_HPS5
Beta-prop_VPS8
WD40_Gbeta
EIF3I
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
133892439
NCBI-ProteinID:
XP_062189195
LinkDB
All DBs
Position
15:complement(1433005..1436796)
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AA seq
495 aa
AA seq
DB search
MEDSNTSTQPHAYGGRRPFWNETLAPVQCSSHRTKRALDDRDVGEVPIVPLADVPTGSAA
CDPGGPGPYPPQLASARNAQRVVRTAWTTSSRYKSPRPDPMSPSSPLPFSTRSMTMASPS
AAADSLVHVAFNSKATHFVAATATGIRVFSCSPLEHVFSKSSFASPDSSGSAGEVTSADV
ILSGHLVAVVFRESADAADSSGRSDKIRYWSELYRQMMSEDMGPSCRGVVRAVRHVGSHV
LVAGEDKVTVHEMSRCGVKRTNGFDTGPNPLGLCALAQVDRGAQAFVLACPLPAKGEVQV
RRPRGCRVDVPAHNSSIACVALSRDGRLLATAGSKGTLLRIFSTTDGKKLQELRRGADRA
DIHCMAFSPDSKWLAASSDKGTIHVFSVKVDLTSWTPEDGDNPDGPNTASAANSNQGWSR
SFLSGFVQVPRYFKQDCSLAKFRLREGVKYLVAFSHEPHTVLIIGMDGSFYRCKFDPVKA
GDMKQLEYRNFMKMK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggaggactctaacaccagcactcagccgcacgcctacggcgggcgccgtccgttctgg
aacgagacgctagctccggttcaatgttcctcccaccgcacgaagcgcgccctcgacgat
cgcgacgtcggcgaggtacccatcgtgcccctcgccgacgtccccaccggctccgccgcg
tgcgaccctggtgggcctggtccatacccgccgcagctcgcgtccgcgcggaatgcccaa
cgcgtcgtacgcactgcctggaccacgtcgtcgcgctacaagagtccccggccagatccg
atgagcccgtcctcacctctcccgttcagcacacgatcgatgacaatggcgtctccctcc
gccgccgctgattcgctggtgcacgtcgcgttcaacagcaaggccacccacttcgttgcg
gccacggccactggcatccgcgtcttctcctgcagccccttggagcacgtgttcagcaag
agcagctttgcctccccggacagctccggctccgccggcgaggtgacctccgccgacgta
atcctctcggggcatctcgtggccgtcgtattcagggagtcggccgacgccgccgacagc
tccggccgaagtgacaagatcaggtactggagcgagttgtaccgccagatgatgagcgag
gacatgggcccctcttgccgcggcgtcgtgcgcgccgtccgccatgtcgggagccatgtc
ctcgtcgctggcgaggacaaggtgacggtccacgagatgtcaagatgcggggtgaagcga
accaatgggtttgacacgggcccgaacccgctggggctgtgcgcgctggcgcaggtggac
cgcggcgcccaggcattcgtgctcgcctgcccgctgccggccaagggcgaggtgcaggtc
cggcggcccaggggctgccgcgtcgacgtgcccgcgcacaactcgagcatcgcgtgcgtc
gcgctgtcccgtgacggtcggctgctcgccaccgccggctccaagggcacgctcctgcgc
atcttcagcaccaccgacggcaagaagcttcaggagctgagaaggggtgctgacagagca
gacatccactgcatggcattctctcctgattccaagtggctggcggcctccagcgacaag
gggacaattcacgtcttcagcgtcaaagtggatttaacatcctggacaccggaggacggc
gataatcctgacggccccaacacagcgtctgctgcaaattccaaccagggatggtctcgc
tctttcttaagtggtttcgttcaggtcccgagatatttcaagcaagattgctcgctggca
aagttccgtctacgtgaaggagttaagtacttggtggcgttcagccatgaaccgcatacc
gtcctcatcatcggcatggatggaagcttctaccgatgcaagtttgacccggtgaaagca
ggcgacatgaaacaattggagtacaggaattttatgaagatgaaatga
DBGET
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