KEGG   Phragmites australis (common reed): 133892453
Entry
133892453         CDS       T10575                                 
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
paua  Phragmites australis (common reed)
Brite
Transcription machinery [BR:paua03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     133892453
Chromosome and associated proteins [BR:paua03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     133892453
    SLIK complex
     133892453
SSDB
Other DBs
NCBI-GeneID: 133892453
NCBI-ProteinID: XP_062189226
LinkDB
Position
15:1780817..1795894
AA seq 1730 aa
MAFFSNSGSRADSGGYNLNEKAEDEGTYKSVRDGDADLSSRQWNLNEKAEDACHSEGEQY
EAGQSGLYSSKSTSGPHARRGGGSSGGPWGTNFLNDSRSKQMAKEVLLDSDRGMEDGSAA
SSHDDIDGSGEGDEMNRENGEVPAEEMLSDDYYDQDGEEQSESLHRGGMKHPSCSTSGAA
AKSASRQKKKPTKYNTYADDDDDEYNDENDDDDDDADEDDPDDVDFEPDSETDKPVDKDK
FVDSGNSDDDDDDELELSDNEDDFVENRRQPKRLKVGVTKTSKGRKLPVQAQRKRGMSFT
DDEYSSGKDSDVPSDDEFSHISKKPDKLHQRTIGHNDVIPINSQNELRTSGRRRTVKKIS
YVESEESDDSEEKSNKQQKFLKEEPEEEDGETIEKVLWHQPKGVSEEAMRNDQSTQPTVA
SLTSDFDQQWDDVEFYIKWKGQSYLHCQWKTLSELQSVSGFKKVLNYTKRVAEEQRYKRA
LSREEVEVHDVGKEMELDLIKQYSQVERIFADRVSKVDGDDLIPEYLVKWQGLPYAESTW
EKDTDIEFAQDTIDEYKAREAATAILGKTVDFQRKKSKASLRRLDAQPEWLKGGKLRDYQ
LEGLNFLVNGWRNDTNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLSTLSNW
AKEFRKWLPNMNVVIYVGNRASREMCQQYEIFSNKKGGRHVKFHTLITTYEVILKDKAVL
SKIKWNYLMVDEAHRLKNCEASLYMTLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPV
KFNNKDSFVEKYKNLSSFNESELANLHKELRPHILRRVIKDVEKSLPPKIERILRVEMSP
LQKQYYKWILERNFQNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSIGDR
NKVERIIMSSGKLVLLDKLLVRLRETNHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGS
TRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR
AHRIGQQETVNIYRFVMCKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKESKKGGSM
FDKNELSAILRFGAEELFKEDKTDEETKRNLESLDIDEILERAEKVETKGDEGEAGNELL
SAFKVANFSSGEDDATFWSRLIQPDPADMVQETLAPRAARSNKSYVEDPQLNKSSNRKRR
AVETQEKPRRRSARTVDTVVSLPFVDGAVAQVREWSFGNMPKKDAARFVRAVKKFGNPSQ
IGLIVGDVGGVLAKAPPEAQIELFDLLIDGCQEAVKEKTDIKGTVLDFFGVAVKAYELLA
RVEELQFLAKRIARYKDPIRQYRIQLPYKKPQWSASCGWTETDDARLMVGIHWYGYGNWE
KIRLDPKLGLTTKIAPATLGERETFLPRAPNLDNRASALLQKEYAKFSGKSSTAKGAPRQ
TVHNDSNSGARSLRGRQKDAKGKDDNKSSKDDIPKRKIVEAEAREEGEISESEAETKYRL
DKEEKWLEWCSEVLDEEQETLKRLDRLQNTSVNLPKEKVLSRIRKYLQIIGDKIGEVVRQ
HSESYKQSRMTMRLWNYVATFSNMSGEQLHDLYLKLSQDQLEAGVGPSHGGNFASVPPNK
GGNSNQLHPSRNQRSTRSLQYASVSLNNNENSGSSEAWKRRRRADPDSQFDTQPSYQPPP
MMTNGNRLQESSSSAGILGWGPVEMRRYGNERPKRGVHASHFPAGHGPLL
NT seq 5193 nt   +upstreamnt  +downstreamnt
atggcattcttcagcaactctggtagcagggctgattcaggagggtacaacttgaatgag
aaggctgaggatgagggcacctacaagtcagtcagggatggggatgctgacttgagctct
aggcagtggaacttaaacgagaaggcagaggatgcctgccacagtgagggggagcaatat
gaagctggtcagtcaggtctgtactcttccaagagcacatctgggccgcatgcccgaaga
ggaggtgggtcgtctggtgggccttggggtacaaactttttgaatgattccagatccaaa
cagatggcaaaagaagtactgttagatagtgataggggaatggaagatgggtctgctgct
agttctcatgatgacatagatggtagtggagagggcgatgagatgaacagagagaatggg
gaagtgcctgctgaggaaatgctttccgatgactattatgatcaggatggtgaggagcag
agtgaatcgttgcatcgtggtgggatgaagcacccaagctgttccacttctggtgcagcg
gcgaagtctgcctccagacaaaagaagaagccgacaaagtacaacacatatgctgatgat
gacgacgatgagtataatgatgagaatgatgatgacgatgatgacgcggatgaagatgat
ccagatgatgtggattttgagccagacagtgaaactgacaagcctgttgataaggacaag
tttgtggatagtgggaattccgatgatgatgacgacgatgagcttgagctctcagataat
gaagatgattttgttgagaatcggaggcaacctaaacgacttaaggttggagtaactaaa
acctccaagggaagaaagttgcctgtacaggcccaacggaaacgagggatgtctttcaca
gatgatgaatattcttcaggaaaagactcagatgtgcccagtgatgatgaattcagtcac
atatcgaaaaaacctgacaaattgcatcagagaaccatcggtcacaatgatgttatccca
atcaattctcaaaatgagcttcgaacttctgggaggaggaggacggtgaaaaaaatctca
tatgttgaaagtgaagaaagtgatgatagtgaggaaaagtcaaataaacaacaaaagttc
ttgaaggaggaaccagaagaggaagacggagaaactattgaaaaggttctttggcatcaa
ccaaagggtgtttctgaagaggcaatgaggaatgaccaatcaactcagcctactgtggcc
agcctaacatcagactttgatcaacagtgggatgatgtagaattctatataaaatggaaa
ggccagtcttatctacattgtcagtggaagacattatcagagctccaaagtgttagtgga
tttaaaaaggttttaaattacacaaaaagagttgctgaggaacagaggtacaagagggca
ctatcacgtgaagaggttgaggtgcatgatgtgggcaaggaaatggagctggatcttatt
aagcaatatagtcaggttgaacggatatttgctgatagggtcagcaaagttgatggagat
gatctgattccagaatatttagtcaaatggcaaggacttccgtatgcagaatctacctgg
gaaaaagatacagatattgaatttgctcaagatacaatagatgaatacaaggcccgtgaa
gctgctacagctatactggggaaaacagttgattttcaacggaagaaaagcaaagctagt
ttgaggaggcttgatgcccaaccagagtggctaaaaggtggtaaacttcgtgattatcag
cttgaaggactcaactttcttgtcaatgggtggagaaatgacactaatgttatacttgct
gatgagatgggtctgggaaaaactattcaatccgtttccatgcttggcttccttcataat
gctcaagaaatcaatggtccttttcttgttgttgtgccactgtcaacattgtcgaattgg
gcaaaggagtttcggaagtggctacccaacatgaatgttgtgatttatgtgggaaaccgt
gccagccgagagatgtgtcagcagtatgaaattttttcaaacaagaagggaggacgtcat
gtaaaattccacacattgataactacatatgaggtgattctgaaggacaaagctgttctt
tccaagatcaaatggaactatcttatggttgatgaagcccaccggttgaaaaactgtgaa
gcatcactgtatatgactcttttggaattcagcactaagaataagctgcttataactgga
acacctttgcagaacagtgttgaggagctttgggcattacttcatttccttgatccagtt
aaattcaacaacaaggatagttttgttgagaaatacaaaaatttgagttccttcaacgaa
agtgagcttgcgaatctgcacaaggaattgaggcctcatatactgaggcgagttataaaa
gatgtcgagaagtctttacctcctaaaattgagcggattctacgcgttgagatgtcaccc
cttcagaaacaatactataagtggattttagagcgaaattttcagaatctgaataaagga
gttcgtgggaatcaggtctcacttttgaacattgttgttgaattgaaaaaatgctgcaac
catccattcttgtttgaaagtgccgatcatggttatggtggagatagcattggtgatcga
aataaagttgaacgcatcattatgagtagcgggaaacttgttttgttggacaaactgttg
gtgagactgcgggagactaaccatcgtgtgcttattttctcccagatggttaggatgttg
gacatcctcgcagaatacctatctcttcgaggattccagtttcagaggcttgatggtagt
acaagagcagatcttcgtcaccaggctatggaacattttaatgcgcctggaagtgatgac
ttttgttttcttttatccacgcgtgccggaggacttggtattaatcttgcaactgcagat
actgtgataatttttgattcagattggaatcctcaaaatgatctgcaggcgatgagtagg
gcgcataggattggccaacaagagactgttaacatctatcgtttcgtcatgtgcaaaagt
gttgaagaggatattttggaacgcgcaaagaaaaagatggttcttgatcacttagttatt
cagaagctaaatgctgagggcaggcttgagaagaaagaatccaaaaagggtggctccatg
tttgacaagaatgaactttcggccatattgaggtttggggcagaggagttgttcaaagaa
gataagactgatgaagagaccaagaggaaccttgaaagtttagacattgatgaaattctt
gagagagctgagaaagttgaaacaaaaggcgatgaaggggaggcaggaaatgagcttctt
agcgctttcaaggttgccaacttttccagtggcgaagatgatgccacattctggagtaga
ctaatacagccagatcctgcagatatggttcaggaaactttggcacctcgtgctgcacga
agtaacaagagttatgttgaagatccccaactcaacaaaagtagcaacaggaaaagaagg
gcagttgagacacaagaaaaaccaaggaggaggtctgccagaacagtggacacagttgtt
tcattaccgtttgttgatggagcagtagctcaagtacgagagtggtcttttggaaatatg
ccaaagaaggacgcagcccgttttgttcgagcggttaaaaaatttgggaatccaagccag
attggattaattgtgggtgatgttggtggtgtactagcaaaggcaccacctgaagctcaa
atagagttgtttgatttgctcattgatggatgtcaagaagcagttaaagagaaaacagat
atcaagggcacagttttggatttttttggtgtagcagtaaaagcctatgaattgttggct
cgtgttgaagagcttcagttcttggcaaagcgcattgcacgttacaaagatccaatcagg
caataccggatccaattaccttacaaaaagccacagtggtcagcaagctgtggatggact
gaaactgatgatgctaggttgatggttggaattcattggtatggctacggaaactgggag
aagatacggttggatccaaagcttggcctgacaacaaaaattgcaccagcaacacttggt
gaaagagagacatttttaccacgtgcaccaaacttggataatcgtgctagtgctctcctg
caaaaggaatatgctaagtttagtggtaagagctcaactgccaaaggagctcctcgccag
acagtccataatgacagcaatagtggagctcgatcattgagaggccgacaaaaagatgca
aaaggaaaagatgataataagtcaagcaaagatgacatcccaaagcgcaagatagtggaa
gctgaagcaagagaagaaggtgaaatttcagaatccgaggcagaaactaaatatcgtctg
gacaaggaagaaaagtggcttgaatggtgttctgaagttttggatgaggagcaggaaact
ttgaagcgcctggataggctacagaatactagtgtaaacttaccaaaggaaaaggttctt
tcaagaattcgcaagtacctccagataattggggataaaattggagaggttgtccgtcaa
cacagcgaatcttacaagcaatcccgcatgacaatgaggttatggaattatgtggcaacc
ttttcaaatatgtctggggagcagctgcatgatctctatttaaagcttagtcaagaccaa
ttggaagctggagttggcccatcccatggtggtaattttgcatccgttcctcccaataag
ggaggtaactcaaatcagcttcatccttcgagaaaccaaaggtcaactaggtctctccag
tacgcttcagtgtctttgaacaataatgagaactctgggagttctgaagcctggaagcgt
cggaggagagctgacccagatagtcaatttgacacccagccttcgtatcaacctcctcca
atgatgacaaatggaaataggttgcaggagtctagcagttctgctggtatccttggttgg
ggtccggttgaaatgagacggtatggtaatgaaaggccaaaacggggtgttcatgccagt
catttccctgctgggcacgggcctctgctgtaa

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