KEGG   Phragmites australis (common reed): 133892509
Entry
133892509         CDS       T10575                                 
Name
(RefSeq) tubulin alpha-3 chain-like
  KO
K07374  tubulin alpha
Organism
paua  Phragmites australis (common reed)
Pathway
paua04145  Phagosome
paua04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:paua00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    133892509
  09142 Cell motility
   04814 Motor proteins
    133892509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133892509
   03036 Chromosome and associated proteins [BR:paua03036]
    133892509
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:paua04812]
    133892509
   04147 Exosome [BR:paua04147]
    133892509
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     133892509
Chromosome and associated proteins [BR:paua03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     133892509
Cytoskeleton proteins [BR:paua04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    133892509
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133892509
  Exosomal proteins of other body fluids (saliva and urine)
   133892509
  Exosomal proteins of colorectal cancer cells
   133892509
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 133892509
NCBI-ProteinID: XP_062189319
LinkDB
Position
15:complement(5933575..5936986)
AA seq 450 aa
MREIISIHIGQAGIQVGNSCWELYCLEHGIEPDGTMSSDTSVGVAHDAFNTFFSETGSGK
HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGADDEGDEGEDY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagagagatcatcagcatccacatcggccaggccgggatccaagttggcaactcctgc
tgggagctctactgcctcgagcacggcatcgagcccgatggcaccatgtccagtgacacc
tcggtgggcgtcgcacatgacgcgttcaacacgttcttcagtgagaccggttcaggcaag
catgtgccgagggccatcttcgttgatcttgagcccacagtcatcgatgaggtgcggacc
ggctcgtaccgccagctcttccacccagagcagctcatctccgggaaggaggatgcagct
aacaactttgctcgtggtcactacactgttggaaaggagattgtagatctatgcctggac
cgtgtgcgcaagctggcagacaattgcactgggctgcagggattcttggtgttcaatgct
gttggtggtggaactggctctggactcggttcactgctgttggagcgtctctcagtggat
tacggcaagaagtctaagcttggtttcaccatttatccttccccacaggtgtcaacagct
gttgtagagccatacaacagtgtcctctcaacacactccttgctcgagcacacagatgtt
gcagtcctcctggacaacgaggctatctatgacatatgccggaggtcccttgacattgaa
aggccaacctacaccaatttgaacaggctgatctcacagatcatatcttcacttactacc
tccctgagatttgatggtgctatcaatgtggatgttaccgagttccagaccaaccttgtg
ccatacccacgcatccatttcatgctttcatcatatgcccctgtaatttctgccgagaag
gcttaccacgagcagctttctgtgcctgaaatcaccaatgctgtctttgagccctcaagc
atgatggccaagtgtgacccaaggcatggaaaatacatggcttgctgcttgatgtaccgt
ggtgatgttgttcccaaggatgtcaatgctgcagttgcaaccatcaagaccaagagaact
gtccagtttgttgactggtgccctactggattcaagtgtggcatcaactaccagccaccc
tccgttgtccctggaggtgacctggcaaaggtccagcgtgccgtgtgcatgatcagcaac
aacactgctgtcgctgaggtattctcacgcatcgaccacaagttcgacttgatgtacgcc
aagcgtgcattcgtgcactggtacgttggggagggtatggaagaaggtgaattctcagaa
gcccgtgaggacctggctgctctcgagaaggactacgaagaggttggcgcagagggcgcg
gacgacgagggtgacgagggagaagattactga

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