KEGG   Phragmites australis (common reed): 133892509
Entry
133892509         CDS       T10575                                 
Name
(RefSeq) tubulin alpha-3 chain-like
  KO
K07374  tubulin alpha
Organism
paua  Phragmites australis (common reed)
Pathway
paua04145  Phagosome
paua04517  IgSF CAM signaling
paua04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:paua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    133892509
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    133892509
  09142 Cell motility
   04814 Motor proteins
    133892509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133892509
   03036 Chromosome and associated proteins [BR:paua03036]
    133892509
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:paua04812]
    133892509
   04147 Exosome [BR:paua04147]
    133892509
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     133892509
Chromosome and associated proteins [BR:paua03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     133892509
Cytoskeleton proteins [BR:paua04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    133892509
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133892509
  Exosomal proteins of other body fluids (saliva and urine)
   133892509
  Exosomal proteins of colorectal cancer cells
   133892509
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 133892509
NCBI-ProteinID: XP_062189319
LinkDB
Position
15:complement(5933575..5936986)
AA seq 450 aa
MREIISIHIGQAGIQVGNSCWELYCLEHGIEPDGTMSSDTSVGVAHDAFNTFFSETGSGK
HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGADDEGDEGEDY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagagagatcatcagcatccacatcggccaggccgggatccaagttggcaactcctgc
tgggagctctactgcctcgagcacggcatcgagcccgatggcaccatgtccagtgacacc
tcggtgggcgtcgcacatgacgcgttcaacacgttcttcagtgagaccggttcaggcaag
catgtgccgagggccatcttcgttgatcttgagcccacagtcatcgatgaggtgcggacc
ggctcgtaccgccagctcttccacccagagcagctcatctccgggaaggaggatgcagct
aacaactttgctcgtggtcactacactgttggaaaggagattgtagatctatgcctggac
cgtgtgcgcaagctggcagacaattgcactgggctgcagggattcttggtgttcaatgct
gttggtggtggaactggctctggactcggttcactgctgttggagcgtctctcagtggat
tacggcaagaagtctaagcttggtttcaccatttatccttccccacaggtgtcaacagct
gttgtagagccatacaacagtgtcctctcaacacactccttgctcgagcacacagatgtt
gcagtcctcctggacaacgaggctatctatgacatatgccggaggtcccttgacattgaa
aggccaacctacaccaatttgaacaggctgatctcacagatcatatcttcacttactacc
tccctgagatttgatggtgctatcaatgtggatgttaccgagttccagaccaaccttgtg
ccatacccacgcatccatttcatgctttcatcatatgcccctgtaatttctgccgagaag
gcttaccacgagcagctttctgtgcctgaaatcaccaatgctgtctttgagccctcaagc
atgatggccaagtgtgacccaaggcatggaaaatacatggcttgctgcttgatgtaccgt
ggtgatgttgttcccaaggatgtcaatgctgcagttgcaaccatcaagaccaagagaact
gtccagtttgttgactggtgccctactggattcaagtgtggcatcaactaccagccaccc
tccgttgtccctggaggtgacctggcaaaggtccagcgtgccgtgtgcatgatcagcaac
aacactgctgtcgctgaggtattctcacgcatcgaccacaagttcgacttgatgtacgcc
aagcgtgcattcgtgcactggtacgttggggagggtatggaagaaggtgaattctcagaa
gcccgtgaggacctggctgctctcgagaaggactacgaagaggttggcgcagagggcgcg
gacgacgagggtgacgagggagaagattactga

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