Phragmites australis (common reed): 133892514
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Entry
133892514 CDS
T10575
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133892514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133892514
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133892514
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
133892514
NCBI-ProteinID:
XP_062189333
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Position
15:complement(29265908..29269967)
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AA seq
375 aa
AA seq
DB search
MAAAPEGGAEEVGESRKLFVGGIPASAQEAELRAHFGRFGEVRSVIVMRDRETGHGRGFG
FVEFEEEAAAASALGDGVRPRHFICGRLVDVKRARTRQPRDQGEQHFQHQQVEQGQGQGH
QDNQPATGNGSVDSGNVNYDSKKVFIGGLRDNITEEEFRAYFETFGTVTDAVVIYDSLTS
RSRGFGFVTFDSEEAVGKVMQQSFHNLNGTKVEAKIAIPKDEQYYRNSRGRGGRPFGGRD
PVVYEGVTYQPYNARYSLYNGYMPQPVPTQPYFPGPYFAMGGYPYGNGYPNQGVMSNVPG
MMARRVPPAYGTYPQMYPGFNFVYRAGYGGADTSFQHGINGGSDNVKGQTTVDIQEVDST
ASVATKFELMKLGSQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgccggagggcggtgctgaggaggtgggcgagagccggaagctgttcgtg
ggcggcatcccggcatccgcgcaggaggccgagctgcgggcccacttcggccgcttcggg
gaggtgcgttccgtcatcgtgatgcgggacagggagacggggcacggccgcggcttcggc
tttgtggagttcgaggaggaggccgccgcggccagcgcgctcggcgacggcgtcaggccc
aggcacttcatctgcgggcgactggtggacgtcaagagggcaaggacaagacagccacga
gaccagggcgagcaacacttccagcatcagcaggttgaacaaggccagggacagggccac
caggacaatcagccggccactggtaacggttctgtggacagtggcaacgtcaactatgat
tcaaagaaggttttcattggcggtttgcgggataacatcactgaggaggagttccgggct
tactttgagacgtttggcactgtaacggatgctgtggtgatatatgacagcttgacaagc
aggtctagggggttcggttttgtcacctttgattcagaggaagcagtgggcaaggtaatg
caacaaagctttcacaacttgaacggaacgaaggtagaagccaagattgctatccccaag
gatgagcagtattaccgtaacagccgaggccgtggcgggcgaccctttggtgggagggac
cctgttgtctacgaaggtgtcacataccaaccatacaatgctagatatagcctctacaat
ggatacatgccacaacccgttcccacacagccctactttcctggtccttattttgctatg
ggaggctatccctatgggaatggatacccaaaccaaggtgtcatgtcaaatgttcctggc
atgatggcaaggcgggttcctccagcctatgggacatatcctcaaatgtatccagggttc
aactttgtatacagagctggttatgggggtgcagatacttcttttcagcatggaattaat
ggtggaagcgataacgtgaagggtcaaaccactgtagatattcaggaagttgacagcact
gctagcgttgcgacaaagtttgaacttatgaagctaggttcacaatga
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