KEGG   Phragmites australis (common reed): 133892553
Entry
133892553         CDS       T10575                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:paua03036]
    133892553
   03400 DNA repair and recombination proteins [BR:paua03400]
    133892553
Chromosome and associated proteins [BR:paua03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    133892553
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133892553
SSDB
Motif
Pfam: MMS19_N MMS19_C
Other DBs
NCBI-GeneID: 133892553
NCBI-ProteinID: XP_062189386
LinkDB
Position
15:complement(26691504..26701406)
AA seq 1151 aa
MARVPPGEWVPHVEAYVDVSRPPTQHSASVDALAALVNKDKLTLFDLVSKMEMYFTTTDH
IVRSRGILLLGEILSRISFKWLDVNTITTLSDFFISRLSDWQAIRGALVGCLALLHRKQG
VGSIVIADVKRLVESFLQNVQVQSLAAADRKLCFQILSCILDQYPEAVKTMDGEQLYGIC
EAIDEEKDPECLKLSFHVVEAVMKLFPDPSGLAAQFASDVFEILSKYFPVYFTHGVGDEL
DATRDDLSRALMHAFCSTPYFEPVAIPLLLDKLSSSLPLAKLDSLKYLDNCIHFYGADRM
VRHASAIWFKLKEVIFNLSPDQLLLTSGSPKDAEKNKNQIVSEALNCLKTAIMYIDSSDK
DLFINLILLDKEIVNKIRSISSAEKFISSSLEDLVQLHALGSVISILAESSTYLCTRVLQ
EHFTHMVDILGTSASYESQQLNTCNRSSSAPDNYGALYLSVQMLSSCREVALVSYEDYSS
VKLAKESWCLILEKKLDQLIHILGSFFTIASQSMFRQEYVSCAVKGLLILATFPEQCSLL
PAKAYEDILLMLTSVVTSKYENINLWRLSLKTLTRIGSSIMEFHTSQKEVIYNRTVVDKI
VYLVESYDTSMPLNLKLEASYEVGTAGLNYMLRVARSLEEAAVTNISEANGRIECAEHAV
HLLECYSNRVLPWLFASGGANELAFSFTMRLWDDIKDLATLNRISSQGLLDSLMMGMKLL
VGMCTEEQQSLIVEKAYGIISSLLSLPLKSLAHHILAVDQLVPSHTVQETALVGMLSSVI
VGLRPLTPVPDMMMMINLFTVFLLKGQMPAAHALASIFNKYLHNPEFSHDNQLDKILDVI
LERCFSNVVFNSYSKISHCSADTSDDANCSDSSSGSILSKIDTLSGLAWIGKGLLMRGDE
KMKDISMFLLKCLWSDQTLASVPSHQEEYIGSDSSDTSLATSAADAFRVMMNDSEVCLNK
KFHARIKPLYKQRFFSILMPIFLSKIKESTAMKTKLALYRAFGHIISNAPVPAVITEAHQ
ILLVMVDSLAKLSLDIHDKNLVYSLLLVLSGMLMDEKGKECILDNIHITISVLTQLVSYP
HMMVVRETALQCLVAFSTFSHSKVYPIWRKGARTEDGRINRRLPEVARHYGRRQSDKHKE
LGFSLLVNQFV
NT seq 3456 nt   +upstreamnt  +downstreamnt
atggctagggtccctcccggagagtgggtcccccacgtcgaggcctacgtcgacgtctcc
cgccctcccacccagcactctgccagtgtggacgcccttgcggccctggtgaacaaggac
aagctgacactcttcgatttggtgtccaagatggagatgtatttcacaacgacagaccac
attgttagatcaagaggaatcctgctcctgggggaaatattgtctcgaatttcattcaaa
tggttagatgtcaataccatcacaacattgtcagatttctttatatcaagattgtcagat
tggcaagcaatacggggagcacttgttggttgcctggctctattgcacagaaagcaaggt
gttggtagtattgtgattgctgatgtcaaaaggcttgttgagtctttcttacagaatgtt
caagtgcaatcacttgcagctgctgaccgcaagctttgctttcaaattctgagctgcata
ctggatcaatacccagaagctgtcaaaacaatggatggtgaacagctgtatgggatctgc
gaagcaattgatgaagaaaaggacccagaatgtttgaagctttcttttcatgtagtggaa
gctgtgatgaagctatttcccgatccatctggtttggcagcacaatttgcaagtgatgtt
tttgagattctgagcaagtattttcctgtctacttcacacatggggtgggtgatgagtta
gatgctacaagggatgacctttctagagcattgatgcatgctttttgttcaaccccatat
tttgagcccgttgccatacctttgcttcttgataaactttcgtcctcccttccactagca
aagcttgattctttaaaatatctggacaattgcattcacttctatggagctgatagaatg
gttagacatgcatcagctatttggtttaagttgaaagaggtgatttttaacctttctcca
gatcaacttttattaacatcaggatctcctaaagacgcagagaagaataagaatcaaata
gtttcagaggctctgaattgtttgaagactgctattatgtatattgattcttcagataaa
gatcttttcatcaatttgatcttgctggataaggagattgtgaataaaatccgttctata
tcaagtgcagaaaagttcatttcgagttcattggaagacctggtccaactacatgccctt
ggaagtgtcatttctattcttgctgaatcatctacatatttatgtactagagttcttcaa
gagcattttacacacatggtcgatattttgggaacctcagctagctatgaatctcagcag
ttgaatacttgtaatagatcatcatctgctcctgacaactatggagcactctatttatct
gttcaaatgctttcatcctgtagagaagtagctttggtatcttatgaagattattcttct
gttaaattagcaaaggagtcctggtgccttatcttagagaaaaagttggatcaattaatc
catatccttggatcattttttactatcgcttctcaatctatgttccgacaagagtatgtc
tcatgtgctgtgaagggcttgctaatacttgcaacattcccggaacaatgctcactcctg
ccggcaaaagcttatgaggatattctgctgatgcttacttcagtagttacaagcaagtat
gaaaatataaatttgtggagattgtcattgaaaacgttgactagaattggttcatctatc
atggagttccatacttctcaaaaggaagtgatttacaacagaactgttgttgacaagatt
gtttatttggttgaatcttatgatacttcaatgcctctcaacctaaaactggaagcaagt
tatgaagttggtactgctgggctgaactatatgttaagggttgctaggtcacttgaagaa
gctgctgtcaccaatatttctgaggctaatggaagaatagagtgtgctgaacatgcagtc
catttacttgagtgctactctaatcgggtccttccttggttgtttgcatctggtggtgcc
aatgaacttgcgttcagcttcactatgcgtctctgggatgatattaaggacttggcaacg
ctaaatagaatcagttcgcagggcctccttgactcactaatgatgggaatgaagctctta
gtcggaatgtgtacagaggagcaacaatcattgattgttgagaaagcatatggcataata
tcatcgctgctgtcactcccactgaaatcactggcacaccatattttggctgttgatcag
ttagttccttcacacactgttcaagaaacagctcttgttggcatgctttcatcggttata
gttggccttcggcctctaacacctgtaccagatatgatgatgatgattaacctctttacg
gtctttttattgaaaggacaaatgccagctgcgcatgcattagcttcaattttcaataaa
tatctacataatccagagttctcacatgacaatcagctcgataaaatacttgatgttatt
cttgagaggtgtttctcaaatgtagtattcaacagctattcaaagatatctcactgttcc
gctgacacttcagatgatgctaattgctcagacagctcatctggaagcatactttctaag
attgataccttgtctggcttggcttggattggcaaaggattgcttatgagaggagacgag
aagatgaaggacatttcaatgtttcttcttaagtgtctatggtcagatcagactttggct
agtgttccatcccaccaggaagaatatattggcagtgattcatcagatacttctcttgca
acatctgcagctgatgccttccgtgtaatgatgaatgattcagaagtctgcctaaataaa
aaatttcacgcaagaattaagccattatataagcagcgtttcttctcaatactgatgccg
atcttcctctctaaaatcaaggaatccactgcaatgaaaacaaaattggcactgtaccga
gcttttgggcatatcatttccaatgctccagtacccgcagttataacagaagcacatcag
attttactcgtgatggttgatagcttagctaaattaagtctggatattcacgacaagaat
ctagtgtacagtttgttacttgtcttatctggaatgttgatggatgaaaaaggcaaagaa
tgcattctggacaatatacatattaccatcagtgttcttacccaacttgtttcctatcct
cacatgatggttgttcgggagacagcattacaatgtttagtagccttttctaccttttct
cactcaaaagtttatcctatttggcgaaagggcgcacgtacagaagatggcagaatcaat
cgacggcttccagaagtggctaggcattatgggcggcggcaaagtgataagcacaaggag
ttaggattttcattgttagttaatcaatttgtttga

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