Phragmites australis (common reed): 133892603
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Entry
133892603 CDS
T10575
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
paua Phragmites australis (common reed)
Pathway
paua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133892603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133892603
03032 DNA replication proteins [BR:
paua03032
]
133892603
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
133892603
Prokaryotic type
133892603
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
133892603
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
PUA_elF2D
UPF0113
Motif
Other DBs
NCBI-GeneID:
133892603
NCBI-ProteinID:
XP_062189458
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All DBs
Position
15:2685001..2688310
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AA seq
591 aa
AA seq
DB search
MSSTPPAVASPASEHTKSKKKKNKSKDATTAAATDPPSLAEAEEKTDGYLIKPQSLVPSL
DTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEHLRYGVINLDKPSNPSSHEVVA
WIKRLLRSEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVCVARFHAAVPDTA
RVARALEALTGAVFQRPPLISAVKRQLRVRTIYESKLLEHDPERHLAVFWISCEAGTYVR
TLCVHLGLLLGVGAHMQELRRVRSGIMGEQDNMVTMHDVMDAMWALDNYKDETYLRRVVM
PLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIETGEEVVLMTTKGEAIAIGI
AEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKLVAEGLLDKHGKPNEK
TPAEWLRNVVLPTGGDVSIASIAAAPEPEKVKVEQDAVATEEVSEKKKKKRRKDEEGDDA
DASVPAKKIKVEEVAEAVEGEKSEKKKKKKKDKGESGSAEAVEVKEEKEEKVDVAEEKDG
SEKKKKKKKSKEGSGAADPESAQNGDGVEAEKSEKKKEKKKKKSRDTEEAQ
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccacaccgccggccgtcgcgtcccccgcctccgagcacaccaaatccaagaag
aagaagaacaagtccaaggacgccaccaccgccgccgcgaccgacccgccgtcgctcgcc
gaggccgaggagaagaccgatggctacctcatcaagccccagtccctggtgccgtccctc
gatacctccacctggccgctcctcctcaagaactacgaccgcctcaacgtccgcacgggc
cactacaccccgctcccctccggccactcgccgctcaagcgccccctcgccgagcacctc
cgctacggcgtcatcaacctcgacaagccctccaacccgtcctcccacgaggtggtcgcc
tggatcaagcgcctcctccgctccgagaagaccggccacagcggcacgctcgaccccaag
gtcaccggcaacctcatcgtctgcgtcgatcgcgccacgcgcctcgtcaagtcacagcag
ggcgccggcaaggagtacgtctgcgtcgcccgcttccacgccgccgtgccggacaccgcg
cgcgtggctcgcgccctggaggcgctcacgggcgccgtgttccagcgcccgccgctcatc
tccgcggtcaagcgccagctcagggtgcggaccatctacgagagcaaacttctggagcac
gatcctgagcgccaccttgcggtgttctggatctcctgcgaggcaggtacctatgtccgg
actctctgtgtgcaccttgggctgctccttggtgtaggggcgcatatgcaggagctgcgc
cgtgtccggtccgggatcatgggggagcaggacaacatggtgaccatgcacgatgtgatg
gacgcgatgtgggcgctcgacaactacaaggacgagacctacttgaggcgggtcgtcatg
ccacttgaggtactgcttactagctacaagaggcttgttgtgaaggattctgctgtaaat
gctatctgctacggtgctaagcttatgatccccgggttgctccggtttgagaatgatatt
gagactggggaggaggtggttctcatgactacaaagggggaggctattgccattggtatt
gctgagatgaccactgctgttatggcgacttgcgaccatggtgcagttgcaaagatcaag
agggtggtgatggacagagacacatacccgaggaagtgggggcttggcccagtggctctc
aagaagaaaaagctggttgctgagggtctccttgataagcatgggaagccaaatgagaag
accccagctgagtggcttcggaatgtggtccttcccactggtggtgatgtatcgattgct
agcattgcagctgctcctgagccagagaaggtgaaggtggaacaggatgcagttgcgact
gaagaggtcagtgagaagaaaaagaagaagaggcggaaggatgaggagggcgatgatgct
gatgcttctgttcctgcaaagaagatcaaggttgaggaagttgctgaggcagtggaaggg
gagaagagtgagaagaagaagaagaaaaagaaagacaagggcgaatcaggatcagctgag
gctgtggaggtgaaggaggagaaggaggagaaggtcgatgtggctgaggagaaggatgga
agtgagaagaaaaagaagaagaagaagagcaaggaaggaagtggcgctgcggatccagag
agtgctcagaatggagatggtgtggaagctgagaagagtgaaaagaaaaaggagaagaaa
aagaagaagagtcgagatacagaggaggcacagtag
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