Phragmites australis (common reed): 133892794
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Entry
133892794 CDS
T10575
Name
(RefSeq) nuclear pore complex protein NUP54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133892794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133892794
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133892794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
CTD
HD_5
Motif
Other DBs
NCBI-GeneID:
133892794
NCBI-ProteinID:
XP_062189726
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Position
15:18952652..18959123
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AA seq
371 aa
AA seq
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MFGTPTSSPLFGNPSSTPAFGTPSTTPAFGTPSSTPSFGAPSSTPAFGTPSSTPAFGALS
AFGAPSSTPAFSALTSLTPAFGTPSSTPAFGASPSPFGFQQQTTPSPSPFGLAGGGQITT
QMAPVAPLPLSPSDRDIQAIVDAYKEDPGNPRYAYRHLLFSVTEPSQRVKPVAASDIMWA
EAMGKLECMDSADRERLWPQLVQGFKDLSHRLKLQRHFQADTYPWIQRLKQQELVIQRRL
LRFVRIVEALENRGYRSPLTKEEADLYERLVAILKRIKGPSADLSKRVNTLLTASCLLAS
TGGVGDPVYIPSSAKVDERSVTELLEALQQQTEAVAKLGNVLKRDIRDLEIMQSEDNDMA
EDSVGRRVLKM
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggaccccgacctcctcccccctcttcgggaacccctcttccacccccgccttc
gggaccccctccaccacccctgccttcggcacgccctcctccaccccttcgttcggcgct
ccgtcgtccacccccgcattcgggaccccatcatcgacgcccgcattcggcgcgctttcc
gcctttggggccccgtcatcgaccccggcgttcagcgcactgacctcgttgaccccggca
ttcgggacgccctcgtcgacaccggccttcggcgcgtcgccgtcgccgttcggatttcag
cagcagacgacgccgtcaccgtcgccgttcgggctggccggcggcgggcagatcaccacc
cagatggcccccgtcgcgccgctgcctctctcgccctccgaccgcgacatccaggctatt
gtggatgcatacaaggaggatcccgggaatccccgctatgcttacagacatctgttgttc
agcgtgacagagccttcgcaaagggtgaagccagttgcggcatctgatattatgtgggcg
gaagcaatggggaagcttgagtgcatggatagtgcggatagggagaggctttggcctcaa
cttgtgcaggggtttaaagatctttcccaccggcttaagctgcaaaggcatttccaagct
gacacatatccttggatccaacggttgaagcagcaagagctggttattcagagacgcctt
ttaaggtttgtgagaatagtggaggcattggagaatcggggttatcgcagtccgttaacg
aaggaggaagctgacttatatgaaagattggttgctatattaaagcggataaaagggcct
agtgccgacctgtctaagagagtgaatactcttcttacagcatcatgtcttctggctagc
actggtggtgttggcgatcccgtctatattcctagttcggccaaagttgacgaacggagt
gttacggagcttcttgaggccttacaacaacaaacggaggcagttgcgaagttaggaaat
gtgttgaagagggatatcagagacctggaaatcatgcaatcagaagacaacgatatggct
gaagacagcgttgggagaagggtattgaagatgtaa
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