Phragmites australis (common reed): 133892975
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Entry
133892975 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133892975
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
paua Phragmites australis (common reed)
Pathway
paua03008
Ribosome biogenesis in eukaryotes
Brite
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
133892975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
TPR_14
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
Gta3
Motif
Other DBs
NCBI-GeneID:
133892975
NCBI-ProteinID:
XP_062189942
LinkDB
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Position
15:complement(29915308..29920067)
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AA seq
674 aa
AA seq
DB search
MADTVQYRLERMTDELDDLERRGLFTRAELADVVRRRRDFEFRLRRHSPLRADFLDYIAY
ELRLDALRNLRKRAIIRAATSEDDDEQDDGDKGGKKRKNKKSNKWKKSISDVAGVLRVLD
IYRMATVRFKGDLDLWFRYLEFCRDKRHGRMKQVLAQAIRYHPKVPGLWIYAAAWEFDQN
LNVAAARALMQSGLRSCPESEDMWIEYLRMELTYLNKLKARKVALGEDVKTLQNNDNDAD
QWKEENKELFMSLNEQGEGPEESGSAGVALEEKEDLFWQQGLLIIQTIYHGALEALPSSL
TLRKKFLEILNSVDLAHSDELKLEVMDDLKKDFSHSEDYWDWFARLQLSGLTNPSNSNRK
DPLMNKLNKSIQVYDEAVRRLPTSKMYSLYAKFWMDVLYPDREESIALFQDAEFDASEFT
SSILKVYENAESCGCLTEDLACQYVSLCLKLERLEEAKNLAEKLCNGPLSNAANLWSLRA
SMEINSLATATGSSSFSKENLSSLFDLFNTVLSKVPITEAEGLWHMAMKLFSHEKIYLEK
LVRCAMLSLSSAGGGDCGASVSSAIIGWYLQRDGMKQARKMYKRFLALPRPSLKFFQYCI
ELEANLASMGDHDARANARKLYDSAIDFYPQERELWRNYYNLELKVGTSETVNAVYWRAR
KVLDDSTALATPGN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcggacactgtgcagtaccgcctggagcggatgaccgacgagctcgacgacctcgag
cgccggggcctcttcacccgcgccgagctcgccgacgtcgtccgccgccgccgcgacttc
gagttccgcctccgccgtcactcaccgctccgcgccgacttcctcgactacatcgcatac
gagctccgcctcgacgcgctgcgcaacctgcgcaagcgcgcaatcatacgcgccgccaca
tccgaagacgacgacgagcaagacgacggcgacaagggcgggaaaaagaggaaaaacaag
aaatcgaacaagtggaagaagtccatctccgacgtcgcgggggtcctccgcgtgctcgac
atctaccggatggccaccgtcaggttcaagggggacctcgacctctggttccggtacctc
gagttctgccgcgacaagcgccacggcaggatgaagcaggttctggcgcaagctattcgc
taccatcccaaggttcccggcctttggatctatgcagcagcatgggaatttgatcagaac
ctgaatgttgctgcagcacgtgcacttatgcagagtggtctcagatcttgtccagaatca
gaggatatgtggattgagtatcttcgcatggagcttacctatcttaacaagcttaaggca
cgaaaggtagctcttggggaggatgtgaagacgctgcaaaacaacgataatgatgcagat
cagtggaaagaggaaaacaaagaactgttcatgtcacttaatgaacaaggtgaaggccct
gaggagtctggctcagctggagttgctctggaggagaaggaagacctgttttggcagcaa
ggattattaatcattcagaccatatatcatggtgcgctggaagctcttccatcaagctta
accttaaggaagaaattcttggagatattaaacagtgttgacttggcgcattctgatgag
ttgaagctagaggtcatggatgacttgaagaaagatttctctcatagtgaggactactgg
gattggtttgctaggcttcagcttagtggattaactaatcccagtaattcaaatagaaag
gatcctttaatgaataagttgaacaaatcaattcaggtgtatgatgaagctgtcagaagg
ctgccaacttccaaaatgtactccctgtatgcaaagttttggatggatgttctatacccc
gatagagaagagtccattgcattattccaggatgctgaatttgatgcttcagagttcact
tcatctatactaaaagtatatgaaaatgctgaatcgtgtgggtgtcttactgaggatctt
gcttgccaatatgtatctctttgcttgaaacttgaaagattggaggaagctaagaatctt
gcagaaaagctttgcaatggtcctctttcaaatgctgcaaatttgtggagcctgagagct
tctatggagataaattcgttggctactgccactggcagctcttcattcagcaaggagaac
ttgagctctctatttgatctatttaatactgtactttcgaaggtacccataactgaggct
gagggattgtggcatatggccatgaaattgttttctcatgagaagatctatttagagaag
ctggtgaggtgtgcaatgctatcattaagttcggctggtgggggtgattgtggcgcttcg
gtttcttctgctatcatcggatggtatttgcaaagagatggtatgaagcaagctaggaag
atgtataagaggtttctggctttaccccgtccgagcctcaagttcttccagtactgcata
gagctggaagctaaccttgcatcgatgggagaccatgacgcccgtgcaaatgctcgaaag
ctttatgattcagcaatcgacttctatccccaggaaagagaactatggagaaactactac
aacttggaattgaaggtgggaacttccgaaactgtgaacgctgtatactggcgtgctcgt
aaggtgctcgatgactccactgccctggccactcccgggaactag
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