KEGG   Phragmites australis (common reed): 133892983
Entry
133892983         CDS       T10575                                 
Name
(RefSeq) uncharacterized protein LOC133892983
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133892983
Spliceosome [BR:paua03041]
 Complex B
  Other components
   Prp19-related factors
    133892983
 Complex C
    133892983
SSDB
Other DBs
NCBI-GeneID: 133892983
NCBI-ProteinID: XP_062189952
LinkDB
Position
15:2294100..2299918
AA seq 846 aa
MSQNTSSVRERLDHARPHPIDHPAYSSLNNTFERALATMHKMPHVWILYLTSLLDQRLLT
RARRAFDRALRALPVTQHDRIWPLYLRLASIQACPVETSLRVFRRYLQFDRSHAENFINF
LISANRWQEAADRLASVLNEDGFRSVKGKTGHQLWLELCEILTKHADEVAGLKVDAILRG
GIRKFTDEVGKLWTSLADYYVRRALFEKARDVFEEGVASVVTVKEFSVVFDAYTQFEQSM
LAAKLEAAEEEGVEDEDERGGRKNGIGKLSKEFLEGFWLNAEDDTDLRLARFERLLDRRP
ELLSSVLLRQNPHNVEEWHRRVKLFEKDPARQVATYVEAVKTVDPMKAVGKPHTLWVAFA
KMYEKHNCLDSAEDIFKRATQVNYKAVDHLASIWCEWAEMELRHNNFDKAIELMRQATAE
PSVEVKRRASAEGNEPVQMKVHKSLKLWSFYVDLEESLGTLESTRDVYERILDLRIATPQ
IILNYAFLLEEHKYYEDAFEVYERGVKIFKYPHVKAIWVTYLTKFVQRYRRSKIERAREL
FHEAVQQAPPEEKKAIYLQWAKFEEDYGLAKRAMNVYDESVRAVPNSEKMSMYEIYIARA
AELFGVPRTRQIYEQAIESGLPDRDVMTMCLKFAELERSLGEIDRSRAIYVHASNYADPN
THSVFWKKWNDFEIQHGNEDTFREMLRIKRTVTASSSQTHFILPEYLMQRDERLNLDEAV
DALKRAGVPEDEMAALERQLAPGPSSAPPAAPSTATTAANRRMNFVSAGVEAQAESSRQQ
TANNEDIELPDESDDEEADVQIAEKSVPAAVFGELGKRAAENREESSDGQENEQLGALER
IKRRRQ
NT seq 2541 nt   +upstreamnt  +downstreamnt
atgtcgcaaaatacatcgtctgtccgcgagcgcctcgaccacgcgcgcccgcaccccatc
gaccacccggcctactcctccctcaacaacacctttgagcgggcgctcgccaccatgcac
aagatgccgcacgtctggatcctctacctcacctcgctcctcgaccagcgcctgctcacg
cgcgcgcgccgcgccttcgaccgcgccctgcgtgcgctgccggtcacacagcacgaccgc
atctggccgctctacctgcgcctagcatcgatccaggcctgccccgtcgagacgtcgctc
cgcgtgttccgccgctacctccagttcgaccgctcccacgcggagaacttcatcaacttc
cttatatcagccaaccgctggcaagaggccgccgaccgccttgcatctgtgctcaacgaa
gatggcttccgctccgtcaaggggaagaccgggcaccagctctggcttgagctctgtgaa
atcctcaccaagcacgctgatgaagtcgccgggctcaaggtggacgccatactgcggggt
gggatacggaagttcactgacgaggttggcaagctgtggacttcgctggccgattactat
gtaaggagggcacttttcgaaaaagccagggatgtatttgaggagggggttgcctcggtg
gtcacagtaaaggagttcagcgtggtgtttgatgcatatacacaatttgagcagagcatg
ctcgcggcaaagctggaggctgccgaggaagaaggggttgaggatgaggatgagcgaggg
ggacggaagaacgggattggaaagttatcgaaggaattccttgagggattctggttgaac
gccgaggatgatactgatttgaggttggcaaggttcgagcggctattggatcgcagacca
gagctccttagcagtgtgctgttgcgacagaatccacataatgtagaggagtggcacagg
agggtgaaactttttgagaaggatcctgcaaggcaagtagcaacatatgttgaggctgtc
aaaactgtggacccaatgaaggcggttggtaaacctcatactctatgggtggcgtttgca
aagatgtatgagaaacataattgtctagatagtgctgaagatatctttaaacgggctaca
caagtgaactataaggcagttgatcacttagccagtatatggtgtgagtgggcagagatg
gagttgaggcacaacaatttcgacaaggccattgagctgatgaggcaagcaacagcagag
ccctctgttgaggttaagaggcgagcttctgctgaggggaacgagcctgtccaaatgaaa
gtacataaatctttgaaactatggagcttttatgtggatctggaggagagccttggaacc
ttggaatctacccgtgatgtttatgagagaatattggatttgcgaattgccactccgcaa
ataattctcaattatgcatttcttctggaggagcacaagtattatgaagatgcatttgaa
gtgtatgaaagaggtgtgaagatattcaagtatccccatgttaaagccatctgggtgacc
tacctcactaagtttgtacagaggtaccggagaagcaagatagagcgagcaagagagctg
ttccatgaagctgtccaacaggctcctccagaggaaaaaaaggccatatatttgcaatgg
gctaaatttgaggaagactatggtcttgcaaaacgtgctatgaatgtatatgatgaatct
gtaagggctgttcctaacagtgaaaagatgagcatgtatgaaatatatatagcacgagct
gctgaactgttcggtgttccaaggacaagacaaatatacgagcaagcgattgaatctggc
ctcccggacagagatgttatgacaatgtgcttgaaatttgcagaattagaaagaagcctg
ggagaaatagaccgttctcgtgccatctatgtgcacgcatccaactatgctgatccaaac
acccattccgttttttggaagaagtggaatgattttgagatccagcatggtaatgaagac
acgttcagggaaatgcttcgcatcaaacgtacagtgactgctagcagcagtcagacgcat
ttcatactcccagagtacttgatgcagagggacgagaggctcaacctggacgaggcagtt
gacgctctgaagcgtgctggcgtccctgaggatgagatggcagccttagagaggcaacta
gctcctggaccatcctcagcaccaccagctgctccaagtaccgctacgaccgctgctaac
aggaggatgaattttgtcagtgctggagtagaggcgcaggctgagagcagcaggcaacag
actgctaacaatgaggacattgagctgcccgacgagagcgacgatgaggaggcggatgtc
caaattgcagagaagagtgttcctgctgcagtgttcggagagctgggcaagagggctgca
gagaacagggaggaaagctcagatggccaagagaatgagcagctgggcgcccttgagagg
ataaagagacgacgtcaatag

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