Phragmites australis (common reed): 133892998
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Entry
133892998 CDS
T10575
Name
(RefSeq) SKP1-like protein 1B
KO
K03094
S-phase kinase-associated protein 1
Organism
paua Phragmites australis (common reed)
Pathway
paua03083
Polycomb repressive complex
paua04120
Ubiquitin mediated proteolysis
paua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133892998
04120 Ubiquitin mediated proteolysis
133892998
09126 Chromosome
03083 Polycomb repressive complex
133892998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133892998
04121 Ubiquitin system [BR:
paua04121
]
133892998
03036 Chromosome and associated proteins [BR:
paua03036
]
133892998
Membrane trafficking [BR:
paua04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
133892998
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
133892998
Cul7 complex
133892998
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
133892998
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
133892998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
133892998
NCBI-ProteinID:
XP_062189962
LinkDB
All DBs
Position
15:complement(3261387..>3262505)
Genome browser
AA seq
208 aa
AA seq
DB search
LHPLTVRAPSEARVSWLSERASAMAAEKGEKGAAAKEVAGERMVTLESSDGEEFHMSEAA
AQLSTLLRHVIEGGGTDNGIPLPKVAARTLEKVIMYCEKHAKAAAKSDSDPSAAAGSSSD
NTADASEDLGKWDRKLVNGLSQDDLFDLIVAADYLVIDGLLDATCRKVADMMKGKTPDEI
RKTFNILNDFTKEEEEEMRREYAWAFDD
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
cttcacccgctcaccgtgagagcgcctagcgaagcgagggtttcgtggttgagcgagcga
gcgagcgcgatggcggcggagaagggggagaagggagcggcggcgaaggaggtggccggc
gaaaggatggtcaccctggagagctcggacggggaggagttccacatgtcggaggcggcg
gcgcagctttcgacgcttctcagacacgtgatcgaaggcggcggcaccgacaacggcatc
ccgctccccaaagtcgccgcaaggaccctggagaaggtgatcatgtactgcgaaaagcac
gccaaggctgccgccaagtccgactccgaccccagcgctgcggccggcagcagcagcgac
aacaccgccgacgcgtcggaggacctggggaagtgggaccgcaagctcgtcaacggcctc
agccaggacgacctcttcgacctcatcgtggccgccgactacctcgtcattgacgggctc
ctcgacgctacctgccgcaaggtcgccgacatgatgaagggcaagacccctgacgagatc
cgcaagaccttcaacatcctgaatgacttcaccaaggaggaggaggaggagatgcgccgg
gagtacgcctgggccttcgacgactag
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