KEGG   Phragmites australis (common reed): 133892998
Entry
133892998         CDS       T10575                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
paua  Phragmites australis (common reed)
Pathway
paua03083  Polycomb repressive complex
paua04120  Ubiquitin mediated proteolysis
paua04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133892998
   04120 Ubiquitin mediated proteolysis
    133892998
  09126 Chromosome
   03083 Polycomb repressive complex
    133892998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:paua04131]
    133892998
   04121 Ubiquitin system [BR:paua04121]
    133892998
   03036 Chromosome and associated proteins [BR:paua03036]
    133892998
Membrane trafficking [BR:paua04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    133892998
Ubiquitin system [BR:paua04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     133892998
   Cul7 complex
     133892998
Chromosome and associated proteins [BR:paua03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     133892998
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     133892998
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 133892998
NCBI-ProteinID: XP_062189962
LinkDB
Position
15:complement(3261387..>3262505)
AA seq 208 aa
LHPLTVRAPSEARVSWLSERASAMAAEKGEKGAAAKEVAGERMVTLESSDGEEFHMSEAA
AQLSTLLRHVIEGGGTDNGIPLPKVAARTLEKVIMYCEKHAKAAAKSDSDPSAAAGSSSD
NTADASEDLGKWDRKLVNGLSQDDLFDLIVAADYLVIDGLLDATCRKVADMMKGKTPDEI
RKTFNILNDFTKEEEEEMRREYAWAFDD
NT seq 627 nt   +upstreamnt  +downstreamnt
cttcacccgctcaccgtgagagcgcctagcgaagcgagggtttcgtggttgagcgagcga
gcgagcgcgatggcggcggagaagggggagaagggagcggcggcgaaggaggtggccggc
gaaaggatggtcaccctggagagctcggacggggaggagttccacatgtcggaggcggcg
gcgcagctttcgacgcttctcagacacgtgatcgaaggcggcggcaccgacaacggcatc
ccgctccccaaagtcgccgcaaggaccctggagaaggtgatcatgtactgcgaaaagcac
gccaaggctgccgccaagtccgactccgaccccagcgctgcggccggcagcagcagcgac
aacaccgccgacgcgtcggaggacctggggaagtgggaccgcaagctcgtcaacggcctc
agccaggacgacctcttcgacctcatcgtggccgccgactacctcgtcattgacgggctc
ctcgacgctacctgccgcaaggtcgccgacatgatgaagggcaagacccctgacgagatc
cgcaagaccttcaacatcctgaatgacttcaccaaggaggaggaggaggagatgcgccgg
gagtacgcctgggccttcgacgactag

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