Phragmites australis (common reed): 133893138
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Entry
133893138 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase AIRP2-like
KO
K25840
E3 ubiquitin-protein ligase AIRP2 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133893138
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133893138
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133893138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Prok-RING_4
zf-RING_5
zf-C3HC4_2
RING_XB3-XBAT31
zf-rbx1
ADD_DNMT3
zf-RING_UBOX
zf-RING_4
zf-RING_10
zf-RING_14
zf-ANAPC11
zf-UDP
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
133893138
NCBI-ProteinID:
XP_062190088
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All DBs
Position
15:1700099..1705341
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AA seq
242 aa
AA seq
DB search
MGKSFRDSLKVLEADIQHANSLASEFRREYDGACLQMRMAYCPAAHFFLFLVQWTDCSFA
GALGLLRILIYKVYADGTTTMSTHERKASIREFYAVIFPSLMQLHEGINEVEDNRQKAIC
IERYRRRDEDQKMVISEIDDDIEDECVICMEINSKVVLPTCSHAMCIKCYRDWRSRSQSC
PFCRDSLKRVNSADLWIYTDDRDVVDMATVRRENLRRLFMYIDKLPTVIPESVFDIYDSH
VK
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtcgttcagggactcgctcaaggtgctcgaggccgacatccagcacgccaac
tcgcttgcttctgaatttcggagggaatatgatggtgcctgccttcagatgaggatggca
tactgccctgcagcccactttttcctttttcttgtgcagtggacagattgcagctttgct
ggtgcacttgggctgttgaggattctaatttataaggtttatgctgatgggacaacaacc
atgtctactcatgaaagaaaagcaagcatcagggaattttatgctgtcatatttccttct
ttgatgcaattacatgaaggaatcaatgaagtggaggacaacagacagaaagcaatatgt
atagagaggtatagaaggcgagatgaggatcagaaaatggtgatatcagagattgatgat
gatatagaggatgaatgtgtcatatgtatggagataaacagcaaagttgttcttccaact
tgtagccatgctatgtgcattaaatgctaccgtgactggagatcaagatcccagtcctgt
ccattctgccgcgacagcctcaagagggtaaactccgccgacctgtggatatacacggat
gacagggacgttgtcgacatggctacggtccgaagggagaacctgaggcgactcttcatg
tacatagacaagttgcccaccgttattccagaatctgtctttgacatctatgattcccat
gtgaagtag
DBGET
integrated database retrieval system
