Phragmites australis (common reed): 133893241
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Entry
133893241 CDS
T10575
Name
(RefSeq) protein argonaute 18-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
paua Phragmites australis (common reed)
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133893241
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133893241
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133893241
microRNA pathway
RISC loading complex
133893241
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133893241
NCBI-ProteinID:
XP_062190200
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Position
15:complement(12992449..13001080)
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AA seq
1051 aa
AA seq
DB search
MASHHRGGGRGGRGQANSNVAQGGYRGGGGRGGQFYGDDRGGRGGGRGFDGRGGYQGSRD
GGGGRGGGGYQEGRGGGGGRGGGGYQEGRGGCGARGGGGYQEGQGVGRGGGGYQEGRGGG
AGGGGGRGGGYQGRGGRGGNDYGRGGGQQGGGSGGDYFGGDPGRGRGGQSQPADLRQAGP
PLSERYAAAAAALRQKFKMMDIHRDEPMLPARPGVGAKGTPCVVKANHFFVGLVDKGLHH
YDVTISPESTLKGVYRELMSKLVSEHQQTDLGGRLPAYDGRKSLFTAGELPFKSKEFVIT
LFGNNNSFDRRTERKYTVVIKHATAVSLHQLMMLMGGQSTDIPGQALQVLDIVMRDIVLN
ERNDMGYVAVGRSFFSPVIEDLKDLGLGIEGWKGFYQSIRPTQNGLSVIIDISSTAFIRP
LPLVEFVKKILYKEKTSNFTSISHMDYVKLKKTLRGVRIEVTHRGDARRKYRIASLTESS
LSHTSFTSSSGVEKTVKDYFREAYHLNLQYGFLPCVQVGTEQRPNYLPMEVCRIVPGQRY
QKKLGDTQVAALMKLTCQKPSVRKQDICQVVERNQYNSTKRANEFGIEVDYNPTSVQARV
LPAPTLKYHGSGAESWCCPKDGRWNMIKRKVVNGARVRNWACVNFCPDLNMAAVQKFCFE
LAKMCRTTGVDMDSLRLPIFMARPDQVEADLRGHYQQARNRLSGQKIDLLLAILPEKNGG
LYGNFKRICETEIGLMSQCCLDKNVEKMSAAYFANVALKINAKAGGRNSVFADPGVSLPI
VSNKATIIFGADVTHPAALDDTAPSIASVVASLDWPEVAKYNGVVRAQGHREEIINGLED
IVKELLLAFQKESKQTPQQLIFYRDGVSEGQFKLVLEKEIPEIEKAWKALYNEKPQITFI
VVQKRHHTRLFPSDQRCMDRSGNVLPGTVVDKMICHPTEFDFFLCSHAGIQGTSRPAHYH
VLRDDNKFTADGLQSLTYNLCYTYSSCTRSVSIAPPAYYAHKLAFRARFYVTQGSDMAST
ASSGNTSAPPAARSRPLPEIKNELKRFMFYC
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccatcaccgtggaggaggccgcggcggccggggccaggcgaactcgaacgtg
gctcaggggggctatagaggcggcggcggccgaggtgggcagttctacggtgatgaccgc
ggcggcaggggcggaggtcgtggcttcgacggccgcggcggctaccagggaagccgtgat
gggggcggtggccgaggcggcggagggtaccaggaaggccgtggcgggggcggtggccga
ggaggcggagggtaccaggaaggtcggggcgggtgcggggcccgaggaggcggagggtac
caggaaggtcagggcgtgggccgaggcggcggagggtaccaggaaggccgtggcgggggt
gcgggtgggggcgggggccgtggcggcggctaccagggacgcggtggccgcggaggcaac
gactacggccgcggcggcgggcagcagggaggaggcagcggtggtgactacttcggcggt
gaccccgggcgcgggcgcggcggtcagagccagcctgccgatctgcgccaagccgggcca
cccctctcggagcgctacgcggctgcggccgccgcgcttcggcagaagttcaagatgatg
gacatccaccgcgacgagcccatgctcccggcgcgccccggggtaggtgccaaggggacg
ccgtgcgtcgtcaaggccaaccacttcttcgtcggcctcgtcgacaagggcctgcaccac
tacgacgtgaccatctcgccggagtcgacgttgaagggcgtttacagggagctcatgtcg
aagctggtgtccgagcaccagcagaccgacctcggcggccgcctcccggcttacgacggc
aggaagtcgctcttcaccgccggtgagctgccgttcaaaagcaaggagttcgtgatcacc
ttgttcggaaacaacaactcctttgaccgaaggacggagaggaagtacacggtggtgatc
aagcacgccacggcggtcagtctgcaccagctgatgatgctcatggggggccaatccaca
gacatcccgggccaggcgctgcaggtcctcgacatcgtgatgcgtgacatcgtgctcaat
gaacgcaacgatatggggtacgtcgcggttggccggtccttcttctcgccggtcatagag
gacctaaaggatctaggcctgggtattgagggatggaaggggttctatcagagcatcagg
cctacacaaaatggcttgtctgtgatcatagacatttcttcaacagctttcattcgaccc
ctgccactggttgaatttgtcaagaagattctttacaaggaaaaaacgagcaactttact
agtattagtcatatggattatgtcaagctcaagaagaccctcaggggtgtgaggattgaa
gtcactcaccgaggagatgcacggcggaagtacagaattgccagcttgaccgaaagttct
cttagtcatacaagtttcacatcgtcctctggggttgaaaagactgtcaaggattacttc
agagaagcataccatctgaatctacagtatggttttctcccatgtgtacaagttggcact
gaacagaggcccaactatcttcctatggaggtttgcaggatagttcccggacagcgctac
cagaagaagctgggagacactcaggttgctgctctaatgaagttaacctgtcagaagcca
tctgtccgcaagcaagacatttgtcaggtcgttgagcgcaaccagtacaacagcaccaag
cgtgcgaatgaatttggcatagaggttgactacaatcctacttcagttcaggctagagtt
ctgccggctccaactctgaagtaccatggttctggagctgagagttggtgctgcccgaag
gatgggcggtggaacatgataaaaaggaaagtagtgaatggagcaagggtcaggaactgg
gcctgcgtcaacttttgtccagatttgaatatggccgctgttcaaaaattctgcttcgag
ttggctaaaatgtgtcgtactactggagtggacatggatagtttgaggcttccaatattc
atggctcgtcctgatcaagttgaagctgatcttcgtgggcactatcagcaagcgcggaac
aggctgagcggtcaaaagattgacctgctccttgctatattgccagaaaagaatggtggc
ttatatggtaatttcaaaagaatctgcgagacagagatcggtctcatgtcgcagtgttgt
ctggataaaaatgtcgaaaaaatgagtgccgcgtactttgcaaatgttgctcttaagatc
aacgccaaggctggaggaaggaactctgtatttgctgatccaggagtaagtttaccgatt
gtttcgaacaaagcaacgattatatttggtgccgatgtcactcaccctgccgctctagat
gataccgctccttccattgcttctgttgttgcctccctagactggcccgaggtggccaag
tataatggtgttgttcgcgcacaaggtcaccgtgaagagatcatcaatggccttgaagac
attgtcaaggaactcctacttgcattccaaaaagagtccaagcaaacgccccagcagctg
atattctacagggacggcgttagcgagggccagttcaaactagtgttggaaaaagaaatc
ccagagatagaaaaggcttggaaagcactttacaatgagaagccacagatcaccttcata
gtggtgcagaagaggcaccacacaaggctattccccagtgatcagcgctgcatggatagg
agtggaaatgttctacctggcacagtggttgataagatgatatgccatccaacagagttt
gatttcttcctgtgcagccatgctgggatccaaggaacaagccgtcctgcacattaccat
gtgctgcgagatgacaacaagttcacagcagatggcctgcagtctctcacatataacctg
tgctacacttattcaagctgcactcgctcagtgtcgatcgctcctcctgcatactacgcc
cacaagctcgcattccgtgcccgcttctacgtcacccaaggctccgacatggcatcgacg
gccagctccggcaatacatctgctcctcccgctgctcgttcgaggccacttccagagata
aagaatgaactgaaaaggttcatgttctactgctag
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