KEGG   Phragmites australis (common reed): 133893303
Entry
133893303         CDS       T10575                                 
Name
(RefSeq) protein SLOW WALKER 1-like
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
paua  Phragmites australis (common reed)
Pathway
paua03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    133893303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:paua03009]
    133893303
Ribosome biogenesis [BR:paua03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    133893303
SSDB
Motif
Pfam: UTP15_C WD40 WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 WDR90_beta-prop_4th EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 133893303
NCBI-ProteinID: XP_062190284
LinkDB
Position
15:23211889..23214287
AA seq 535 aa
MAADTSKPFFPAAPHPALLPSRGAASRASPEASYWRAFRSSELVSGAEFPVTDLSFAPAT
GRATPTLAAAWSTSVHLFSGEPLEPLPKISVAGDLAFSPSFRSDGALLAAGDKKGVVRVF
RADKPTAGPLRTLRAHAAETRVVRYPVFGGDKLHLLTAGDDALLAYWDVPSETPVFTVPT
AHRDYIRGGAASPADCNLFATGSYDRSVKLWDARTGNTGPSLSFSHGEVVESVLFLPSGG
LLATAGGNVVKIWDVIGGGRLVHLVESHVKTVMALALGKLCNTGEVRLVSAGIDGYVKSF
DFGKLKITHSMRHPQPLLSVACSPCGSVLVAGSSKGKIYMGKRKKVAVDDEEGRKGVSGE
IDWVSPEPEKPVLRPNYFRYFLRGQNEKAKDGDFVIEKPKKVKFAEHDKLLRKFRHKDAL
VSALVKNNARSVVAVMEELVARRKLVRCIGNLGTEELGLLLEFLRRNATLPRYARFLLGV
ANKVVEMREEDIRSDEKLRVHIRNLKRMVAEEIQIQHTLQGIQGMISPMLALASR
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggccgctgatacctcgaagcccttcttcccggcggcgccgcaccctgcgcttctcccg
tcccgcggcgccgcatcccgcgcttccccggaggcctcctactggcgcgccttccgctcc
tccgagctcgtctccggcgccgagttccccgtcaccgacctcagcttcgccccagccacc
ggccgagccaccccgaccctcgccgccgcgtggtccacctccgtgcacctcttctctggc
gaacccctcgagccgctccctaagatctccgtcgccggcgacctcgccttctccccttcc
ttccgctccgacggtgccctcctcgccgccggcgacaagaagggcgtcgtccgcgtcttc
cgcgccgacaaacccacggcggggcccctccgcacgctccgcgcccacgccgccgagacc
cgcgtcgtccggtacccggtcttcggcggcgacaagctccacctcctcactgccggcgac
gacgcgctcctcgcctactgggacgtgccctcggagacgcccgtctttaccgtccccacc
gcgcaccgggactacatccgcggcggcgccgcatcccctgccgactgcaacctctttgcc
actggctcctacgaccgcagcgtcaaattgtgggatgcccgcacgggaaacaccggcccg
tctttgtctttctcccacggggaagtggtggagagcgtgctgttcctgccgtcgggtggg
ctgctggccaccgctggagggaatgtggtcaagatttgggatgtcattggcggcggacgg
ctcgtgcacttggtggagagccacgtcaagacagtgatggcgcttgcgcttgggaagctt
tgcaacaccggggaagtccgtctggttagtgcggggattgatggttatgtgaagagcttt
gattttgggaagcttaagatcacacactcgatgcggcatcctcagccactgctgtctgtg
gcatgctcaccctgtggttcggttctggtggctgggtcttcgaaggggaagatttatatg
ggcaagaggaagaaggtggcggtggatgacgaggaagggaggaagggtgtcagtggtgag
atcgattgggtatcgcctgagccggagaagccagtgttgaggccaaattactttaggtac
ttccttcgcggacagaatgagaaggccaaggatggagactttgtgattgagaagcccaag
aaggtgaagttcgcggagcatgataagttactgagaaagttcaggcacaaggatgctctt
gtttcggctctggttaagaacaatgcgaggagcgttgtggctgtgatggaggagctggtt
gcgaggagaaagcttgtgaggtgcattgggaatttgggaacagaggaacttgggcttctg
ctggagttccttcgccggaatgcaactttgccaaggtatgcaaggttcttgcttggggtg
gcaaacaaggtggtggagatgcgtgaggaggatatccgatcggatgagaagctgagggta
cacattaggaatcttaagagaatggttgcagaggagattcagatacagcacacgttgcag
ggaattcaagggatgatctcacccatgctggcacttgccagtagatga

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