Phragmites australis (common reed): 133893303
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Entry
133893303 CDS
T10575
Name
(RefSeq) protein SLOW WALKER 1-like
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
paua Phragmites australis (common reed)
Pathway
paua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133893303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133893303
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
133893303
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
133893303
NCBI-ProteinID:
XP_062190284
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All DBs
Position
15:23211889..23214287
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AA seq
535 aa
AA seq
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MAADTSKPFFPAAPHPALLPSRGAASRASPEASYWRAFRSSELVSGAEFPVTDLSFAPAT
GRATPTLAAAWSTSVHLFSGEPLEPLPKISVAGDLAFSPSFRSDGALLAAGDKKGVVRVF
RADKPTAGPLRTLRAHAAETRVVRYPVFGGDKLHLLTAGDDALLAYWDVPSETPVFTVPT
AHRDYIRGGAASPADCNLFATGSYDRSVKLWDARTGNTGPSLSFSHGEVVESVLFLPSGG
LLATAGGNVVKIWDVIGGGRLVHLVESHVKTVMALALGKLCNTGEVRLVSAGIDGYVKSF
DFGKLKITHSMRHPQPLLSVACSPCGSVLVAGSSKGKIYMGKRKKVAVDDEEGRKGVSGE
IDWVSPEPEKPVLRPNYFRYFLRGQNEKAKDGDFVIEKPKKVKFAEHDKLLRKFRHKDAL
VSALVKNNARSVVAVMEELVARRKLVRCIGNLGTEELGLLLEFLRRNATLPRYARFLLGV
ANKVVEMREEDIRSDEKLRVHIRNLKRMVAEEIQIQHTLQGIQGMISPMLALASR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgatacctcgaagcccttcttcccggcggcgccgcaccctgcgcttctcccg
tcccgcggcgccgcatcccgcgcttccccggaggcctcctactggcgcgccttccgctcc
tccgagctcgtctccggcgccgagttccccgtcaccgacctcagcttcgccccagccacc
ggccgagccaccccgaccctcgccgccgcgtggtccacctccgtgcacctcttctctggc
gaacccctcgagccgctccctaagatctccgtcgccggcgacctcgccttctccccttcc
ttccgctccgacggtgccctcctcgccgccggcgacaagaagggcgtcgtccgcgtcttc
cgcgccgacaaacccacggcggggcccctccgcacgctccgcgcccacgccgccgagacc
cgcgtcgtccggtacccggtcttcggcggcgacaagctccacctcctcactgccggcgac
gacgcgctcctcgcctactgggacgtgccctcggagacgcccgtctttaccgtccccacc
gcgcaccgggactacatccgcggcggcgccgcatcccctgccgactgcaacctctttgcc
actggctcctacgaccgcagcgtcaaattgtgggatgcccgcacgggaaacaccggcccg
tctttgtctttctcccacggggaagtggtggagagcgtgctgttcctgccgtcgggtggg
ctgctggccaccgctggagggaatgtggtcaagatttgggatgtcattggcggcggacgg
ctcgtgcacttggtggagagccacgtcaagacagtgatggcgcttgcgcttgggaagctt
tgcaacaccggggaagtccgtctggttagtgcggggattgatggttatgtgaagagcttt
gattttgggaagcttaagatcacacactcgatgcggcatcctcagccactgctgtctgtg
gcatgctcaccctgtggttcggttctggtggctgggtcttcgaaggggaagatttatatg
ggcaagaggaagaaggtggcggtggatgacgaggaagggaggaagggtgtcagtggtgag
atcgattgggtatcgcctgagccggagaagccagtgttgaggccaaattactttaggtac
ttccttcgcggacagaatgagaaggccaaggatggagactttgtgattgagaagcccaag
aaggtgaagttcgcggagcatgataagttactgagaaagttcaggcacaaggatgctctt
gtttcggctctggttaagaacaatgcgaggagcgttgtggctgtgatggaggagctggtt
gcgaggagaaagcttgtgaggtgcattgggaatttgggaacagaggaacttgggcttctg
ctggagttccttcgccggaatgcaactttgccaaggtatgcaaggttcttgcttggggtg
gcaaacaaggtggtggagatgcgtgaggaggatatccgatcggatgagaagctgagggta
cacattaggaatcttaagagaatggttgcagaggagattcagatacagcacacgttgcag
ggaattcaagggatgatctcacccatgctggcacttgccagtagatga
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