Phragmites australis (common reed): 133893429
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Entry
133893429 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133893429 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
paua Phragmites australis (common reed)
Brite
Membrane trafficking [BR:
paua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133893429
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
133893429
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133893429
NCBI-ProteinID:
XP_062190419
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Position
15:complement(208273..216802)
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AA seq
1082 aa
AA seq
DB search
MDAQIVLHYGVPYTASVLAFDPVQRLLAVGTLDGRIKIFGGDNIECLLISPKSVPYKFVQ
FIQNQGLLVAISNENEIQVWNLEFRQLFYSSQWDVNITAFAVIEGTFLMYLGDENGLLSV
LKYDVDDGKLQRMPYNVPIRSLAEAAGVSLQDPQPIVGILPQPDTFGTRVLIAYEKGLLV
LWDVSEDHAISVRGYGDLHMKGQVTGAQRDASEDQLNNTLDESEEEREICSLCWASKGCS
TIAVGYMTGDILLWDMTTISSRQDKQSDVSSNVVKLQLASGSRRLPVIVLHWSAGSAADS
NKGEHLFVYGGDDMGSEEVLTVLSLESNAGLESVRCMSRIDLKLDGSFADMILVPDTEVP
DKSRKSALFILTNPGQLNVYDGGSLFSVQNTIEGNAVPEAQKFPVAVPTIDPNITVTNLC
SLTGREYPNISLKKFCARQNATPFIPGNMKWPLTGGVPSEMSLNEDHAVERIYIAGYQDG
SVRIWDATFPVLMPMFVLDGKVADVNLDGANASVSSLAFCSLNMTLAVGTTSGLVRIYKL
REHTGGSSFHFVSESKQEVHVVHHGRGFHCHVAFVASNSPVRSLLFTASGDVIAAGYQNG
QVAMFDPSQLSIIFAVDCASGTNSPVVSLSSYSVAASAAKADQAKKESPEGAKVPRDVLL
SLTKEARVTVLDRSTGVMINSHVLDQKQSSAVSIYVIDGASDEKQTQLSEDKSPSQGQTR
KEGNDLDKKQAQGVEKHQKNAFQLSHNYGSDSLLLVCCEDVLLLFSPASLIQGSSKHLHK
TKLAKPCCWSAVFKNTDDKICGLILAYQTGTIELRSVPDLSIVAESSLMSLLRWSYKTDM
DKSTSSSNGHIALVNGSEFAIISLIASENDFRIPESLPCLHDKVLAAAAEAAINFSSDQR
RKQNPAAGILGGIIKGIKAKAEGNVKMNRNFTEQTPSEQLESIFLKESFVEPSIPLPNDP
IELSIDDIEIDDEVPLAPAPASSSTSHVNKKTTEEERAKLFEGSSYVDKPRMRTPQEILT
KYKFGGDAAAAAAHAKDKLMQRQEKLERISQQTAELQNGAENFASLAQELAKTMENKKWW
KL
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcagatcgtacttcactacggagttccctacaccgcctcagtactcgcgttt
gatcccgtccagcgcctcctcgccgtcggaacgctggatggtaggataaaaatatttgga
ggcgataatatcgaatgcctcctgatatcacccaagagtgtgccatacaagtttgtgcag
ttcatacaaaatcaggggcttctggttgccatatctaatgagaatgaaatccaggtatgg
aatcttgagttcaggcaactattttattcctcccagtgggacgtcaacattactgctttt
gcagtcatagaggggacctttctgatgtaccttggtgatgagaatggtcttctttctgta
ttgaagtatgatgtagatgacgggaagcttcaaaggatgccatacaatgttcctatacgg
tccttagccgaagcagctggtgtttccttacaggatcctcaacctattgttggaatactg
ccccaacctgacacttttggaacaagggtgctaattgcgtatgagaaaggattgctagtt
ctttgggatgtatcagaggaccatgcaatttctgttagaggctatggggatttacacatg
aagggtcaagtaactggtgctcagagggatgctagtgaagatcaattgaacaatactctt
gatgaaagtgaagaagagagggaaatttgctctctttgttgggcatcaaaggggtgctca
accattgcagttggctatatgacaggagatatacttctatgggacatgactacaatatcc
tctaggcaagacaagcaaagcgatgtttcatcaaatgttgttaagctgcagctggcgtca
ggaagtcgtaggcttcctgttattgtcttgcattggtctgctgggtcagcagcagattct
aataaaggagagcatctttttgtatatggtggtgatgatatgggatctgaagaagttctc
acggttcttagcttggaatcaaatgctggattagaatcagtcagatgcatgtcgcggatt
gatctcaagcttgatggatcctttgctgatatgatacttgttccagataccgaggttccc
gataaaagccgaaaatctgcacttttcatcttgacaaatcctggacaattgaatgtttat
gatggtggttctctattttctgtgcaaaacacaatagagggaaatgctgttcctgaagca
cagaaatttccagttgcagttcctacaattgatcccaacataacagtcacaaatctttgt
tcactaactggaagagaatatccaaatatttcactgaagaaattttgtgctaggcaaaat
gccacacctttcataccagggaacatgaaatggcctttgactggtggggttcctagtgag
atgtcactgaatgaagatcatgctgttgaaagaatatacattgcaggctaccaagatggt
tctgtgagaatttgggatgcaacatttccagttctaatgccaatgtttgtcttggatgga
aaggtggctgatgttaatttggacggagcaaatgcttctgtatcatctctggctttttgt
tcattaaacatgactttggctgttgggacaacaagtggtctggtccgcatctataaactt
cgtgagcacactgggggttcaagctttcactttgtgagtgaatctaagcaagaagttcat
gttgttcatcacgggagagggtttcattgtcatgttgcctttgtggcatcaaattcccca
gtgcgatctctgctgtttacagcttcaggggacgtcattgcagcaggctatcagaacggt
caggtggcaatgtttgatccaagtcagctatcgattatattcgccgtggattgtgcatca
ggaacaaattctcctgttgtgtccttgagcagttacagtgtagctgcatctgctgcaaaa
gcagatcaggcgaaaaaagaaagtccggaaggtgcaaaagtacccagagatgttcttctt
tccttgacaaaggaggctcgcgttactgtacttgatagatcaactggtgtgatgataaat
tcacatgtcttagatcaaaagcagtcatctgctgtttccatatatgtcatagatggagct
tcagacgagaagcaaacccaattatcagaagacaaatccccaagtcaaggtcagacaaga
aaagaaggcaatgatcttgacaaaaaacaagcacaaggagttgaaaagcaccaaaaaaat
gctttccagctttcacacaactatggttcagattcacttcttttggtctgctgtgaggat
gtgttgcttttgttttcgccggcatcattgattcagggaagcagcaagcatctgcataag
acgaaacttgcaaaaccttgttgctggtcagcagttttcaagaacacggatgacaaaatt
tgtgggttgatattagcttatcagacaggcactatagaattgagatctgttccagaccta
tctattgttgccgagagctccttgatgtcattattgagatggagttacaagacagacatg
gataaatccacaagctcctcaaatggacatatcgctttggtgaatgggtctgagtttgca
atcatctctctcatagcctcagagaatgacttcaggattccagaatctctgccgtgcctt
cacgacaaagtacttgcagcagctgctgaagcagctattaatttctcaagtgaccagaga
agaaagcagaatccagctgcaggaattcttggaggcatcattaaaggaatcaaagccaag
gctgaaggaaatgtgaaaatgaacagaaatttcactgagcaaacccccagcgagcagttg
gagtcaattttcttgaaagaatcatttgttgaaccatcaataccacttcctaatgatcca
atagaactgtcaattgatgacattgagattgatgatgaagtaccactagccccggcacca
gcatcctcctccacatctcacgtgaataagaaaacaacagaggaagagagagcgaagcta
tttgaagggtcaagctatgttgataaaccgagaatgagaactccccaggaaattcttacc
aaatataagtttggcggggatgcagcagcagctgctgctcacgcgaaagataagctcatg
caacggcaggagaaactcgagagaataagccaacaaacagcagagcttcagaatggagca
gaaaactttgcttccctcgcccaggagcttgcgaaaacaatggagaacaagaagtggtgg
aagctataa
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