KEGG   Phragmites australis (common reed): 133893472
Entry
133893472         CDS       T10575                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133893472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:paua03041]
    133893472
   03400 DNA repair and recombination proteins [BR:paua03400]
    133893472
Spliceosome [BR:paua03041]
 Complex B
  Other components
   Prp19 complex
    133893472
 Complex C
   Prp19-CDC5 complex
    133893472
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    133893472
SSDB
Motif
Pfam: BCAS2 THOC7 HAUS6_N Arc_MA DUF5930 Spectrin_Dys-1 DUF724
Other DBs
NCBI-GeneID: 133893472
NCBI-ProteinID: XP_062190487
LinkDB
Position
2:complement(2318210..2321800)
AA seq 254 aa
MASSSATREVLMLEAPPSDPSGAPWRAPPDAEAVDALPYIDGDYGDPAVKREVDRFVEEE
MRRGQRKPADFLRDLPPVPVAGFEDHPMLAKEYERVRAGKPPFMLDMSRYGLEPPPMNKR
NDIAAWRQALRNAQSQLQHQIIRIENLELMLKYGVEVWKLQNRQMESVLSRMQKMAVEYN
ERIETVNRERKFHQQNTGGQLHALTMEWQELCQKNIAIQAACVDMQKHIDQLKLEGKELG
MLMDDNAETNSQAS
NT seq 765 nt   +upstreamnt  +downstreamnt
atggcctcgtcgtcagcaacgagggaggtgctcatgctggaggccccgccttccgacccg
tcgggggcgccgtggcgcgcgccgccggacgcggaggccgtggacgcgcttccctacatc
gacggcgactacggcgacccggcggtgaagcgggaggtcgaccgcttcgtagaggaggag
atgcggcgcggccaacggaagcccgccgacttcctacgcgacctgccccccgtccccgtc
gccggattcgaggatcatcctatgcttgctaaagagtacgaacgagttagggctggcaaa
ccaccttttatgttagatatgtcccgctatggtttggagccacctccaatgaacaagcgg
aatgatattgctgcctggaggcaggctttacgtaatgctcagagccagctgcagcatcaa
attataaggatagagaatctggagcttatgttgaagtatggtgttgaggtttggaagctc
cagaacagacaaatggaatcagttctgtctagaatgcaaaagatggctgtagaatacaat
gaaaggattgaaactgtcaatcgtgagaggaaattccaccagcaaaacactggaggacaa
ctccatgccctgacaatggaatggcaggagctgtgtcaaaaaaatatagctattcaggct
gcctgtgttgatatgcagaaacatatagatcagcttaaacttgaaggaaaagaactggga
atgctcatggacgataatgctgaaactaattcacaagcatcatga

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