Phragmites australis (common reed): 133893508
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Entry
133893508 CDS
T10575
Name
(RefSeq) protein SHORT-ROOT 1
KO
K27743
protein SHORT-ROOT
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133893508
Transcription factors [BR:
paua03000
]
Eukaryotic type
Other transcription factors
GRAS
133893508
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GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
133893508
NCBI-ProteinID:
XP_062190519
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Position
15:complement(5234660..5237316)
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AA seq
586 aa
AA seq
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MDTLFRLVSLQASEQQQQQSASYNSRSTTSSGSRSSSHQTNASYNYYYHSNSGGGGGQYY
YGQQQQQQYYLEPYQEECGNAHHLYMDEDFSSSSSSRQHFHSHGATVQPPTSSTPTPTAP
TPPLSTSSTAAGAAHALFEAADLSFPPDLNLDFSSPASSSGGGAASSAAVGGGGGGRWAS
QLLLECARAVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLR
TLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAASSEPQRFHIL
DLSNTFCTQWPTLLEALATRSADDTPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFA
RLMGVPFSFRAVHHAGDLAELDLDTLDLRDGGATTALAVNCVNSLRGVVPGGARRRDAFA
ASLRRLDPRVVTVVEEEADLVASDPDTSDQGSETEAAFLKVFGEGLRFFSAYMDSLEESF
PKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADD
VRSLLRRYREGWSMREAALDDSAAPGAGVFLAWKEQPLVWASAWRP
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggatacgttgtttaggttggttagcctccaagcctcagagcagcagcagcagcagtcg
gcgtcatacaactcgaggagcaccacgtcgagcgggtcgaggtcgtcgtcgcaccagacc
aacgcctcctacaactactactaccacagcaacagcggcggcggcggcgggcagtactac
tacggccagcagcagcagcagcagtactacctggagccgtaccaagaagaatgcggcaac
gcccaccacctttacatggatgaagacttctcctcctcgtcctcgtcgaggcagcacttc
cactcgcacggcgcgacggtgcagccgccgacgtcgtccacgcccacgccgacggcgccg
acgcccccgctgtccacgtcgtccaccgcagcgggagcggcgcacgcgctgttcgaggcg
gctgacctgtcgttcccgccggacctcaacctcgacttctcgtccccggcgtcgtcgtcc
ggcgggggcgcggcgtcgtcggcggcagtcgggggaggaggcgggggcaggtgggcgagc
cagctgttgctggagtgcgcgcgagcggtagccgcgcgcgacagccagcgcgtgcagcag
ctgatgtggatgctcaacgagctggcgtcgccgtacggcgacgtggagcagaagctcgcg
tcctacttcctgcaggggctcttcgcgcggctcacggcgtccgggccgcggacgctgcgc
acgctcgcggcggcgtccgaccggaacacgtcgttcgactcgacgcgacgcacggcgctg
cggttccaggagctcagcccgtggtcgtcgttcgggcacgtggcagccaacggggccatc
ctggagtcattcctggaggctgccgcggcgtcgtcggagccgcagaggttccacatcctc
gacctgagcaacacgttctgcacgcagtggcccacgctgctcgaggcgctcgccacgcgg
tccgccgacgacacgccgcacctctcgatcaccaccgtggtgtccgccgcgccgtccgca
ccgacggccgccgtgcagcgcgtgatgcgggagattgggcagaggatggagaagttcgcg
cggctgatgggcgtgcccttcagcttccgcgccgtgcaccacgctggggacctggcggag
ctcgatctcgacacgctcgacctacgcgacggcggcgccaccacggcgctcgccgtcaac
tgtgtcaactctctgcgaggcgtcgtgccgggcggcgcccgccggagagacgcgtttgcc
gcgtccctccgccgtctcgatccgcgggtcgtcaccgtcgtcgaggaggaggccgatctg
gtggcctcggaccccgacacatccgatcaaggcagcgaaacggaggcggcattcttgaag
gtgttcggtgagggcttgcggttcttttcggcttacatggattcgcttgaagagagcttc
ccgaagacaagcaacgagaggctggcactagagaggggagcaggacgtgccattgtcgac
ttggtatcgtgcccggcgtcagagtccatggagcggcgggagacggcggcgtcatgggcg
cgccgcatgcggtcggccgggttctccccggtggcattcagcgaggacgttgccgacgac
gtgcggtcactgctgcgccggtaccgggagggctggtcgatgcgcgaggcagcgttagac
gactcggcggcgcctggagcaggcgtgttcctcgcgtggaaggagcagcctctcgtgtgg
gcaagcgcgtggaggccatga
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