Phragmites australis (common reed): 133894426
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Entry
133894426 CDS
T10575
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00900
Terpenoid backbone biosynthesis
paua01100
Metabolic pathways
paua01110
Biosynthesis of secondary metabolites
Module
paua_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
133894426
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
paua01006
]
133894426
Enzymes [BR:
paua01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
133894426
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
133894426
2.5.1.29 geranylgeranyl diphosphate synthase
133894426
Prenyltransferases [BR:
paua01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
133894426
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
133894426
NCBI-ProteinID:
XP_062190846
LinkDB
All DBs
Position
2:complement(3256074..3257481)
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AA seq
375 aa
AA seq
DB search
MDKLASCFLQHGTSSQSFKPCTLQGSTSPLKPAPGRRSVSIVRCVPTKLAATGARGTSAE
VGTGRNTKPQGGGGGASFDFERYLSAKAKAVQDALDAALSRLGRCPERLSESMRYSVLAG
GKRVRPVLAITACELVGGAAAAATPVACAAEMIHTASLIHDDMPCVDNDALRRGRPANHV
AFGEPTALLAGDALLAFAFEHLARGCSALGVPADRVLRAVAELGSAAGVGGVAAGQVADK
ASEGAPNVSLASLEYIHVHKTARLLEACAVSGAVVGGGGDEEVERVRRYAHSVGLLFQVV
DDVLDVTRTSEQLGKTAGKDVAAGKATYPKLMGVDGARAYAAELLAKAEAELDVFDAARA
APLRHLARFIAYRQH
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttggcatcctgcttcctccaacacggaacatcatcccaaagcttcaagccc
tgcactcttcagggatccacttcaccactcaagcctgcgcctggcaggcgatccgtttcc
atcgtccggtgcgtcccgaccaagcttgccgccacaggcgccagaggcaccagcgccgaa
gtcggcaccggccgcaacacgaagccgcaaggcggcggcggcggcgccagcttcgacttc
gagcgctacctgtcggccaaggccaaggcagtgcaagacgcgctggacgcggccctgtcc
cgcctcggccgctgcccggagcgcctgagcgagtccatgcgctactcggtcctcgctggc
ggcaagcgcgtgcgccccgtgctggccatcaccgcgtgcgagctcgtcggtggcgccgcg
gccgcggccaccccagtcgcctgcgccgccgagatgattcacaccgcgtcgctcatccac
gacgacatgccgtgcgtggacaacgacgcgctccgccgcggccgccctgccaaccacgtc
gccttcggcgagcccacggcgctgctcgcgggcgacgcgctcctcgccttcgcgttcgag
cacctggcccgcgggtgctccgcgctcggcgttcccgcggaccgcgtgctacgcgccgtc
gcagagctcgggagtgcggcgggcgtcgggggcgtcgccgcggggcaggtcgcggacaag
gcgagcgagggcgcgccgaacgtgagcctggcctccctggagtacatccacgtgcacaag
actgcgcggctcctcgaggcctgcgccgtctccggcgccgtcgtcgggggaggaggggac
gaggaggtcgagcgcgtccggcggtacgcgcactccgtcgggctcttgttccaggtggtg
gacgacgtgctggacgtgacgcgcacgtcggagcagctcgggaagacggccgggaaggac
gtggccgccggcaaggcgacgtacccgaagctgatgggcgtcgacggggcgcgtgcgtac
gccgccgagctcctggcgaaggccgaggcggagctcgacgtgttcgacgccgcgcgcgcc
gcaccgctgcgccacctcgctcggttcatcgcgtacaggcagcactga
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