Phragmites australis (common reed): 133894740
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Entry
133894740 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133894740
KO
K12592
exosome complex protein LRP1
Organism
paua Phragmites australis (common reed)
Pathway
paua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133894740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133894740
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
133894740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sas10_Utp3
Motif
Other DBs
NCBI-GeneID:
133894740
NCBI-ProteinID:
XP_062190887
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Position
16:complement(12439785..12442679)
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AA seq
205 aa
AA seq
DB search
MAATAAEGPSAVPPSVVSAAEEALAAAEAVGDHLSQLLAAAAEDPDAVVELPPLRRARAF
LAVAQAATSLFAVRLKCSGIDPDEHPIRKELERLSLWQEKLNRFEDWDKAPLRPTTTLNK
QAAARFIGHSLSHLTSDQKRSMQAISRGGGRGWSGQKKKAEPLPEKKSVRAAAEEFLAKA
AQELIGHNDSRVKGPARLVPDEDED
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccgccgcagaaggcccctccgcggtgccgccgtcggtggtctccgccgcc
gaggaggcgctcgcagccgccgaggccgtcggggaccacctctcccagctgctcgcggcg
gctgccgaggaccctgatgccgtggttgagctcccgcccctgcgccgggcgcgcgccttc
ctcgccgtggcgcaggccgcgacctccctcttcgcagtgcggctaaagtgttcgggaatt
gaccctgacgaacaccctatcagaaaggagcttgagaggttaagcctgtggcaggagaag
ttaaatcgatttgaggactgggacaaggcaccacttcgtcctactactacactcaataaa
caagcagcggcaagattcattggacactcgctatcccatttgacatctgatcagaagagg
agcatgcaggcaatcagtaggggaggaggaagaggctggtctgggcagaagaaaaaggca
gagcccttgccagagaagaagtctgttcgtgctgctgcagaagagttccttgcaaaggct
gctcaggaacttattgggcataatgatagcagggtgaagggccctgctagactcgttcct
gatgaagacgaggactag
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