Phragmites australis (common reed): 133894881
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Entry
133894881 CDS
T10575
Name
(RefSeq) serrate RNA effector molecule-like
KO
K27103
serrate RNA effector molecule
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133894881
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
133894881
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GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
133894881
NCBI-ProteinID:
XP_062191049
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Position
16:27336064..27341892
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AA seq
643 aa
AA seq
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MAEVADASPPPPPPPTGGGDRKRGRSSPVLPSPPPGPPPPGPHSKRYRRDEGSGGFDRRR
LGPGGGGGYEQDDRRYGNDHGGTGGRGGDGRYMNRAPDWPDSGRGGWNEAPGNTRREGLM
SYKQFIQELEDDISPVEAQSRYEEYKSEYVTTQKKAYFDLHKDEDWLRNKYHPTNLESVI
ERRNELSRATANEFFLDLQSGSLDTGPGLTGLATSKSGNNSGKNVEDVDTDGKKGKLGKG
PDDLYYAAPKAHPVSSEARRIQIDIEQAQALICKLDSEKGIENNVLSASDHDKSGRDNSH
GSMGPIVIIRGSSTVKGLEGAELLDTLVTYLWRIHGVDYYGMSETNEPKGLRHVKADART
YNGASSNATEWENKLDSFWQDRIQGQDPLELLKAKEKIDAAATEVLDPYVRKIRDEKYGW
KYGCGAKGCTKLFHAPEFVQKHIKLKHADVVVELTSKVREDVYFENYMNDPKAPGGTPIM
QQHAPRGKGRHRPPIESRLRDERGNRRFDRNVDSPPHDGSSENPDDLVYDSFGDPIMHGA
FPPDIPAPPVLMPVPGAGPLGPFIPAPPEVAMRMMRDQGGPPPFEPPAGPHPRRAGRGGG
APMGGPSPIFNAPPLLHDPRRIRSYQDLDAPEDEVTVMDYRSL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggtcgccgacgcgtcccctccccctccccctccccccaccggcggcggcgac
aggaagcgcggccgctcctcgcccgtgctcccttcgccgccccccgggcccccgccgccg
gggccgcacagcaagaggtaccggagggacgagggcagcggagggttcgaccggcgccgg
ctcgggccaggtggaggcggagggtacgagcaggacgaccggaggtatggaaatgaccat
ggtggcacaggaggaagaggtggtgatggccgatacatgaatcgtgcaccagattggcca
gattctggacgcggtggatggaatgaagcccctggtaacactcgtagggaaggcctgatg
tcgtacaagcagttcattcaggaacttgaagatgatatttcaccagttgaagctcaaagc
agatatgaggagtacaagtcagagtacgttacaactcagaagaaagcatactttgacctc
cataaggatgaggattggttgagaaataagtaccatcctacaaaccttgaatctgtcata
gaaagaaggaatgaactgtcaagagctactgcaaatgaatttttcctagatttgcagagt
ggaagtctggacactggcccagggttaacgggtttggcaacgagcaaatcgggaaataat
agtggtaaaaatgtagaagatgtggacacagatggtaaaaaaggcaaacttggaaagggc
cctgatgatttatattatgctgctcccaaggctcacccagttagttccgaagctcggcgg
attcaaattgacattgagcaagctcaagctctcatttgtaaacttgattctgagaagggt
attgagaacaatgttctctcggctagtgaccatgacaagtcaggcagggataactcacat
ggttcaatggggccaattgttataatacggggatcatctactgtgaagggtcttgagggt
gctgagttgttggacactcttgttacctatttatggcgcatccatggtgtggattattat
ggtatgtccgagacaaatgaacccaaaggcctaaggcatgtgaaagctgatgcaaggaca
tataatggggctagctcaaatgcaactgaatgggagaataaacttgattcattctggcaa
gacaggattcaaggtcaggatcctttagaattattgaaagcaaaggagaagattgatgca
gccgccactgaagtcttggatccatatgtgaggaaaataagggatgagaagtatgggtgg
aagtatggttgtggagccaagggttgcactaaacttttccatgctcctgagtttgtccag
aagcatattaaactcaagcatgcagatgtggtggttgagctaacttcaaaagtgagagaa
gatgtttactttgagaactatatgaatgatccaaaggcgcctggtggaacacctatcatg
cagcaacatgctccaaggggaaaaggcagacaccggcctccaatagagagtcggctgaga
gatgaacgtggaaatcgtaggtttgacaggaatgttgattcaccgccacatgatgggtct
agtgaaaaccctgatgatcttgtttatgattcgtttggtgatccaattatgcatggtgcc
tttcctccagatattcctgctcctccagtgctgatgcctgtgcctggtgctggtcctcta
ggaccgtttattcctgcaccaccggaagttgccatgcggatgatgagggatcagggtggg
ccacctccttttgagccacctgcgggtccacatcctaggagagcagggaggggtggtggt
gccccaatgggtggtccatccccaatcttcaatgctcctcctcttctgcatgatcctcgt
agaatacggagctatcaagaccttgatgctcctgaagatgaagtgactgttatggactac
cgaagcttgtag
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