KEGG   Phragmites australis (common reed): 133894891
Entry
133894891         CDS       T10575                                 
Name
(RefSeq) DNA polymerase epsilon subunit B
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
paua  Phragmites australis (common reed)
Pathway
paua03030  DNA replication
paua03410  Base excision repair
paua03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    133894891
   03410 Base excision repair
    133894891
   03420 Nucleotide excision repair
    133894891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paua03032]
    133894891
   03400 DNA repair and recombination proteins [BR:paua03400]
    133894891
Enzymes [BR:paua01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     133894891
DNA replication proteins [BR:paua03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    133894891
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      133894891
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT DNA_pol_D_N CcmE
Other DBs
NCBI-GeneID: 133894891
NCBI-ProteinID: XP_062191059
LinkDB
Position
16:23818429..23823034
AA seq 533 aa
MAAPSAATRRKLQRKFRLRGFTLKVDALEEAAAFLDRFPDAEDDALDLLLDELDKEPLQS
SILDRDAVRRVVALLVEAEEAVDAASLQTTSARSALRVVDAFVVPRFHYDPIKKVFYEHT
GRLAIHGEAGDKASLYRDRYQVLLQRLSRDKYFSKPAFDTVVAEDGSCEITSIQSLIGCT
GRRWIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQV
NTCGFPPLEDREASLSLLMGLDFFGGGVVPTEETLRLTSLEQKAVNDMFVILSDVWLDNP
ETMEKLAIVLDGYDCVEVVPSLFVLMGNFCSKPCNLAFNSFEELRLQFGKLGEMIAARSR
LKEHSRFLFIPGPDDAGPSKALPRCALPKYLIEELQKHIPNAIFASNPCRVKFYTQEIVF
FRQDLLYRMRRSCLIPPTTEETSDPFEHMVATITHQSHLCPLPLTVQPIIWNYDHCLRLY
PTPHTIVLGDKSEQKAFKYTGITCFNPGSFANDSTFAAYRPCTKEVELSALEG
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggcggcgccgtcggcggccacgcgcaggaagctgcagcgcaagttccggctgcgcggc
ttcaccctcaaggtggacgccctcgaggaggctgccgccttcctcgaccgcttccccgac
gccgaggacgacgcgctcgacctcctcctcgacgagctcgacaaggagccgctgcagtcg
tcgatactggatcgggacgcggtccggcgcgtggtggcactgctcgtcgaggcggaggag
gcggtcgacgcggcatcgctgcagaccaccagcgcccgctcagcgctgcgggtggtggac
gcgtttgtcgtcccgcggttccactacgacccaatcaagaaagtgttctacgagcatacc
ggcagattagctattcatggagaagccggagataaagcttccctttatagggacagatat
caagtgctgcttcagaggctctctcgcgataaatatttctctaagccagcttttgacacg
gttgtggcagaagatggtagttgcgagataacttctatacagtctctaattggatgcact
ggacggagatggattatgggggtcatatctcagttggaggagcgccagttctacttggag
gatcttactggagcagtgccaattgacttatcgaatgccaaaatcacttcaggttttttt
gttgaaaatactgtaattgtcgctgagggggagctgctttcaaatggcattttccaggtc
aatacatgtgggtttcctcccctagaagacagggaagcatcactttcattgcttatgggt
cttgatttctttgggggaggtgtagtaccaactgaagaaacgctaagattaacatcactg
gaacaaaaggccgtgaatgatatgtttgtcatactttcggatgtttggctggacaatcct
gagactatggagaagttagctattgttcttgatggttatgattgtgtggaggtggtgcct
tccctctttgttttgatgggcaatttctgctctaagccctgcaatctagcattcaattca
tttgaagaactcagattgcagtttggaaagcttggcgagatgatcgcagctcgatctaga
ttaaaggaacatagtcgtttcttattcattccaggtcctgatgatgcaggcccttctaaa
gctctcccaaggtgcgcacttccgaaatatctaattgaagagcttcagaagcacatccca
aatgcaatcttcgcaagcaacccttgcagggtgaagttttatacacaagaaattgtgttt
ttccggcaagatctcctttacaggatgcgacggtcatgtctaattcccccaacaacggaa
gaaacaagtgacccttttgagcatatggtagcaactatcacccatcagagtcatctttgt
ccattgcctcttactgttcaacctatcatatggaattatgatcattgccttcggttgtat
ccaacccctcacacgatagtattgggtgacaagagcgagcagaaagccttcaaatatacc
ggaattacttgctttaatccgggttcttttgcgaatgacagcaccttcgctgcataccgt
ccttgcactaaggaggttgagctttctgcattagaaggctaa

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