Phragmites australis (common reed): 133894950
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Entry
133894950 CDS
T10575
Name
(RefSeq) zinc finger CCCH domain-containing protein 43-like
KO
K03260
translation initiation factor 4G
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133894950
03012 Translation factors [BR:
paua03012
]
133894950
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133894950
mRNA cycle factors
Stress granule specific factors
133894950
Translation factors [BR:
paua03012
]
Eukaryotic type
Initiation factors
eIF-4
133894950
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
Torus
lpg1496_N
Motif
Other DBs
NCBI-GeneID:
133894950
NCBI-ProteinID:
XP_062191133
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All DBs
Position
16:complement(15478434..15494132)
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AA seq
593 aa
AA seq
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MRIPQTTSPRLHHCSYHYVTFGSCKHGMNCISHHPPKLSEPERRYPAGDQQEQVPEYPQR
HGEPDCSHYVKFGSCKYGMNCMFNHPPNPSVALRQAHEKQEPEYPRRPGEPDCSHYVKFG
SCKYGINCIFNHPPNPSGWQETEYPQRPGEPDCSYYVKFGSCKHGMNCRFNHPLRKLVMH
FPGRACNCNHHEVEKVKLNFLGLPLRRGTGLCSYYMRTGICKFGTNCKFDHPDPELEQEN
WDAIQGSSQQNFYSVLDREELHEQPVPFMLRDSPVERVRYTRNQLLQLREASQIVDVPKV
ILELKKDIDVELHDEDHSWAYNDWNVQTQSYNRYDLADSREWRSHSPQTQSYKCYDLADR
CEWRLRSAQTPVAVSEEKSWNNIREEEESNDSSGKQEQLYKHGQLCFQFESNNQPMLDCE
KFRFTPLENVHVPNIMFENMLDSSSTAPEANLAINTTNGSKQGSRDASIIGTNDKDVHKK
SEEAMLSKSSNQEPNSTKPEKNYMHEEFNHLVDLGDNVSPSNSSALLRINRVGCSISEIM
ELVIEAGAEEGSDEHFIATQLFIRSEYREMFLTHTTKGRLGWLKRMCQLKKQL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcccccagacaacatcacccaggctccatcactgctcctaccactacgtgaca
ttcgggagctgcaagcacgggatgaactgcatatcccaccaccctccgaagctctctgaa
ccagaacggcgttaccctgccggcgaccagcaggagcaggtgccagagtacccgcagcga
cacggggagcccgactgctcccactacgtcaagtttggcagctgcaagtacgggatgaac
tgcatgttcaaccaccctccgaacccctctgtagccttacgccaagcccacgagaagcag
gagccggagtacccacggcgccctggggagcccgactgctcccactacgtcaagttcggc
agctgcaaatacgggataaactgcatattcaaccaccctccaaacccctctggatggcag
gagacggagtacccgcaacgccccggggagcccgactgctcctactacgtcaagttcggg
agctgcaagcatgggatgaactgcagattcaaccatcctctccgcaagctggtgatgcat
tttcctgggagagcatgcaactgcaaccaccacgaagttgagaaagtgaaactgaacttt
cttgggcttccacttcgtcgagggacaggactgtgttcatactacatgcgtactggaatc
tgcaaattcggcactaactgcaagtttgaccacccagatcctgaactagaacaagagaat
tgggatgctattcaaggatcctctcaacagaacttttactcggtgcttgaccgtgaagaa
ttgcatgagcaacctgttcccttcatgcttcgagactcgcctgttgagcgagtccgttac
actaggaaccaacttcttcagctgcgcgaggcttcacaaattgttgatgtacctaaggtc
atcttggaactcaagaaagacattgatgtagaacttcatgatgaagatcatagttgggct
tacaatgactggaatgtacaaactcagtcatacaatcgctacgatctggcagacagccgt
gaatggcgttcacattctccacaaactcagtcatataaatgctatgatctagcagacaga
tgtgaatggcgtttacgttctgcacaaactcctgtggctgttagtgaagagaaatcttgg
aacaacatccgtgaagaagaagaatccaatgattcaagcgggaagcaagaacaactttac
aagcatggtcaattgtgcttccagtttgaatctaataatcagccaatgttggattgcgag
aagtttcgctttacaccactagagaatgtccatgtgccaaatataatgtttgagaatatg
ctggattcaagttcaacagcgcctgaagctaatttggctatcaatactactaatggaagc
aagcaaggttcccgtgatgcaagcattattggcacaaatgataaggatgttcataagaaa
tctgaagaggcaatgttaagtaaatcttctaatcaagaaccaaattcaacgaagcctgag
aaaaattacatgcacgaagaattcaatcatctggttgaccttggtgataatgtgagccca
agcaattcttcggcattattgaggatcaatcgagtcggatgcagtatttccgagattatg
gagttagttattgaagctggagctgaggaaggcagtgatgaacatttcattgctacccaa
ttatttattagatcagaatatagggaaatgtttcttactcatactactaaaggaagactt
gggtggcttaaaaggatgtgccaattgaagaaacaactatag
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