KEGG   Phragmites australis (common reed): 133894965
Entry
133894965         CDS       T10575                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
  KO
K12897  transformer-2 protein
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133894965
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:paua01009]
    133894965
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:paua03041]
    133894965
Protein phosphatases and associated proteins [BR:paua01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     133894965
Spliceosome [BR:paua03041]
 Common components
  Common spliceosomal components
   SR proteins
    133894965
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 133894965
NCBI-ProteinID: XP_062191158
LinkDB
Position
16:18057453..18062872
AA seq 362 aa
MGMETNPGPAWLAKAFGRCRAGLSPGPRQPALRGQKRLIALEAIFSNPQALVVRPSRVPL
SSSQTAPAPASPSSLAIDTYDGDCRFSTQMSQSKEVRYTARSITPPANRNGTSKLPPPMR
RSPSRSPPPKRSISRSPHPRSPKRHSTSRSPPRRRGRSRSRDRSRSRSEDDRNPGNNLYV
TGLSTRVTEDDLEKFFSKEGKVKHCHVVLDPRSKESRGFAFVTMDTVDDARRCIKYLHRT
VLEGRLVTVEKAKRTRERTPTPGKYCGQRGGSQRSPSPYRSRRREHSHSRDRKRERSRSR
DRRRERSRSRDRRRERSRSRDRRRVRSRSRDRRGSSPHERDSQRRRGDRSRSPTGNGNHK
AD
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgggcatggaaacaaatcccggcccggcctggcttgcgaaggcctttggacgatgccgg
gctggcctatctccgggcccacgccagcccgctctgcgggggcaaaaacgtctcatcgcc
ttggaggcgattttttccaatccgcaggctctcgtcgtcaggccgtctcgcgtgcctctc
tcgtcctcgcagactgcgccggcgccggcgtcgccttcttctctcgcgatcgacacctac
gacggcgactgccgcttctccacgcagatgtcacaatccaaggaagtgagatacactgca
cggtctattacacctcctgcaaatcggaatggcacttcaaagttgccccctccaatgaga
cgcagcccttcaaggtcacctcctccaaagaggagtatctcaaggtctccacatccaagg
agtccaaagaggcacagcacttcaaggtctcctcctaggagacggggtagatcaaggtca
agggataggagtcgatccaggagtgaagatgatagaaatccagggaataacctttatgtc
actggattgtctactcgtgtaactgaagatgaccttgagaagttctttagtaaagaagga
aaggttaaacactgccatgttgttcttgatcctcgttcaaaagaatcccgtggctttgcc
tttgtgacaatggatactgttgatgacgcaagacgctgcatcaagtatctgcaccgcact
gtacttgaaggtcgcctggtcactgtagagaaggctaaaagaactcgagagaggacccct
actcctggaaaatactgtggtcagagaggaggatctcaaaggagcccatcaccttaccgt
tctcgcaggagggagcactctcactcaagggatcgcaaaagggaacgatcacgctcaagg
gatcgccgaagggagcgttctcgctcaagggaccgccgcagggagcgctcacgctcaagg
gaccgccgcagagtgcgctcacggtcaagggaccgcaggggcagctcgccacatgaaaga
gactctcagagaaggcgcggagatcggtccaggtcaccaactggcaacgggaaccataaa
gcagactag

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