Phragmites australis (common reed): 133894966
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Entry
133894966 CDS
T10575
Name
(RefSeq) DNA topoisomerase 1 beta-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paua03032
]
133894966
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
133894966
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Topoisomerases
133894966
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
RodZ_C
Motif
Other DBs
NCBI-GeneID:
133894966
NCBI-ProteinID:
XP_062191162
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All DBs
Position
16:3243336..3249562
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AA seq
902 aa
AA seq
DB search
MAIVNPNPVMFDDDDDEAPISFKRSSTSVKPTPSKQEGSSGNARPVRSPKPVASNPQKNG
VMTISRPLQLKPQSSSPNNRPWGSGQPNSSAEHSSKSNNIDKSKLKRPYVREEQPDDSDD
DKPIGLRRKVEEKKLNRVDMGGEKADDSDEDHKPLSLKIKSSKMPSNSTSKAVLQKTAPK
IEQPEDDSDDDKPLASRLSTNAAPKSGGNVSDDSEDEKPLAARFLKVTGSVNLKSCSSNK
GLNNDRNGPQNLGKRPLDNNNQTGSSLKKAKPSNLATSASVKRESKADDNDNTPLAQRLK
MGESSKGKSSAKNVNKKSPASLKKDSKRMKTKMKTKKMMKNSQFSKTMRVPPGSGGGQKW
TTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYATKKTFIENFF
NDWRKILGKNHIIKKFELCDFTPIYEWHLREKEKKKQMTSEEKKALREDKLKQEEKYMWA
VVDGLKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIQPSDITINIGKGVPVPECPIPGES
WKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLKGHIQKIRD
NYTKDFKSKDPTRKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVDNVTCMPPNKL
QFDFLGKDSIRYFNTVEVEQLVYKAIEDFRAGKKAGEPLFDKLDTTRLNAHLKDLMPGLT
AKVFRTYNASITLDDILHKETEDGTLLEKIAVYQRANKEVAIICNHQRAVSKSHDSQMTR
MNEKIDELKAQRDELKVDLSKAKKGRPLGNDKDGKAKRNLAPEGIEKKITTLESKIEKME
MDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIAKFGWAMDVDPEF
RF
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggctattgtcaaccctaaccctgttatgttcgatgacgacgacgatgaggctccgatt
tccttcaagaggtcaagtacttccgtgaagcccaccccctcgaagcaggagggatcatca
ggaaatgccaggcctgttaggagcccgaaacctgtggcttcaaatccacagaagaatggg
gtgatgactatttcgaggccgctacaactgaagccacagtcctccagcccaaataatcgg
ccttggggatctggtcagccaaacagttcagctgaacatagttcaaaaagcaataacatt
gataagagtaaactgaaaagaccttatgtgagagaagagcaacccgatgattcagatgac
gacaagcctattggattaaggagaaaggttgaggagaagaaattgaatagagttgatatg
gggggtgagaaggcagatgactcagatgaagatcataagccattgagtctgaagatcaaa
tcgtccaaaatgccttccaatagcacgagtaaggctgttttgcagaaaactgcaccaaaa
attgagcagcctgaggacgattcagatgatgacaaaccattggcaagcaggttgtccact
aacgctgctcctaaaagtggaggtaatgtctctgatgattcagaggacgagaagccattg
gctgcccgatttttgaaagtaactggcagtgtaaatctaaaatcatgttcttccaacaag
gggttaaacaatgatagaaatggcccacagaatttgggtaaaaggcctctagataataat
aatcaaacgggttcatctctcaagaaggcaaagccttcaaatcttgcaacttctgcaagt
gtcaaaagagaatccaaggcagatgacaatgacaacacacctcttgcacaaaggctgaaa
atgggcgagtcttcaaaaggcaagtcatctgcaaagaatgtcaacaagaagagtcctgca
tcgttgaagaaggacagcaagagaatgaaaacgaaaatgaaaacaaagaagatgatgaaa
aattctcagttctcaaagacaatgagggtacctcctggatctggtggtggacagaaatgg
actaccttggagcacaatggtgttattttccctcctccatacaagtctcatggcgtcaaa
atgctttacaatgggcaacctgttgatctgacgccagaacaagaggaggttgcaacaatg
tttgctgtgatgaaagacacagagtacgcgaccaagaagacattcatcgagaactttttc
aacgactggagaaaaattcttggtaaaaaccatattatcaagaaattcgagctttgtgat
ttcaccccgatatatgaatggcacctcagggagaaggagaagaagaagcagatgacatca
gaggagaaaaaagcattgcgggaagataaattgaaacaagaggagaagtacatgtgggct
gttgtagatggtcttaaagagaaggttggcaatttcagagtagaaccacctggcttgttc
aggggacgtggagaacatccaaagatgggaaaactgaagcgacgcattcaaccaagcgat
attacaataaatatcggaaaaggggttccagtccccgaatgtccaatacctggagaaagc
tggaaagaagtcaaacatgacaatactgttacatggttggccttttggaatgatccaatt
agccaaaaagatttcaagtatgttttcctggcagcaagcagtgcactgaaggggcaaagt
gacaaagagaaatatgagaaatccagaaaattgaagggtcacatacaaaaaattcgtgac
aattacacaaaggatttcaaaagcaaagatccgacaaggaagcaaattgctgtggcaaca
taccttatagataaactagcccttagggcaggcaatgaaaaggatgatgatgaagctgac
actgttggttgctgtacgctgaaagttgataatgttacttgtatgcccccaaataagctt
cagtttgactttcttggtaaagattctataagatacttcaacactgtagaggttgaacag
ctcgtgtacaaggcaattgaggatttccgtgctgggaaaaaagcgggagaacctctcttt
gacaagctcgatacaactaggctaaatgctcacctaaaggacctaatgcctgggcttact
gcaaaagtgttccgtacatataatgcttccatcaccttggatgatattttgcacaaagaa
acagaagatggaactcttcttgaaaaaattgctgtctatcaacgagcaaacaaagaggtt
gccataatctgtaaccatcagcgtgctgtctcaaaatcacatgattctcagatgaccaga
atgaatgaaaagattgatgaattgaaggcccagagggatgagttgaaagtagacttgagc
aaagcaaagaaaggaaggcctctgggtaatgataaagatgggaaggcaaagaggaatttg
gcgcctgaagggattgaaaagaagatcacaacacttgaatccaagatagagaagatggag
atggataagaagataaaagaggatttgaagacagtagcacttggaacatcaaagatcaac
taccttgatcctagaattaccgtggcatggtgcaaacgccatgaagtccctattgagaag
attttcaacaaatcacttatcgcgaaattcggatgggcaatggacgtcgacccggaattc
agattctag
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