Phragmites australis (common reed): 133895051
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Entry
133895051 CDS
T10575
Name
(RefSeq) two-component response regulator ORR25-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
paua Phragmites australis (common reed)
Pathway
paua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133895051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133895051
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
133895051
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
CdhC
CDC45
Motif
Other DBs
NCBI-GeneID:
133895051
NCBI-ProteinID:
XP_062191243
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Position
16:complement(11084752..11090211)
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AA seq
707 aa
AA seq
DB search
MDVDKFRAGLRVLAVDDDSVSLKLIEKQLRHCNYDVTTAMHAEAALEMLRARKDADQFDL
VISDVHMPGMDGFKLLELIGLEMDIPVIMLSANDDMETMMKGIKHGACNYLVKPVHIEQL
RNLWMHVVRKSKTDPRNCINSGDDDAGQKSQSADAEGQKDGASHTRKNSRKKKKDGDDAE
EDKGNTSTQKRQRIRWSAQLHRKFVEVIDQIGVDRAIPKKIVEMMNVDGLSRENVASHLQ
KYRLYLKKLSVDKFRRSNPFADEPEWNKGNPINMNGLESFKHNLEHGRYQPSLSFAGSWN
SSNPFARMNSPSVFGTHSLLPTKSVQLMSTQRNLCIPRNDMGSINHGGSLLKDGVPGSQQ
NARKFILSGNSYANVSNGALSSASELFPSRSSFANSPNSMAFNRSKSFPSGASGNSFANI
SNDSPPLVTGMGFPCSRSGKSYASILRGKMLAASRGIPFDADNSFTNVADGEMLAPSSHF
PVQSPDMANQPSVQMQSSYAEIFRQFVREDPRFAGLSSSSNTWKTAAPSKFPDLCHKDGT
SGGPSQGNSLKINQFSRLAASSSQMATFGNEFQNQTAELMRRETTPMVGFNEQVAPFNLG
SNANSTAMTNDNSAPGSASSIISSLPNLQIDNSVMPTQMLNGGGASGNLSEQAFCDKLNN
INESLMGTSEAQNGMSGDLDDFFSDWLNQDYFKNGDAFMDGDREFAP
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggacaagttccgggcggggctacgcgtgctcgccgtcgacgatgacagcgtc
tccctcaagctcatagagaaacagttacggcattgcaactacgatgtgacgacggcgatg
cacgcagaggcggcgctggagatgctcagggcgaggaaggacgctgaccagttcgacctg
gtgatcagcgacgtgcacatgccgggcatggacgggttcaagctcctcgagctcatcggc
ctcgagatggatatcccagtgatcatgctatccgcgaacgatgacatggagactatgatg
aaggggataaagcatggtgcttgtaactatttggtgaagccagtgcacatcgaacaactt
aggaacttatggatgcatgtggtgaggaagagtaagactgatccaaggaactgcatcaac
agtggcgatgatgatgctggtcagaagtcgcaatctgcggatgctgagggtcagaaggat
ggtgcaagccacaccaggaagaattcgaggaagaagaagaaggatggagatgatgctgaa
gaggacaaggggaacacatcaactcagaagaggcagaggatccggtggtccgctcagcta
caccgcaagtttgtggaagttatcgatcagattggcgtggatagggctattccaaagaag
atagtggaaatgatgaatgtggatggcctcagtagagagaatgttgcaagtcatctgcag
aagtaccggctctacctgaaaaagctcagcgttgacaaattcaggcgctctaatccattt
gctgacgaacctgagtggaacaaagggaaccccatcaacatgaatggactggaaagtttc
aagcataacctggaacatggtagatatcagccatccctatcctttgctggctcttggaac
tcaagcaacccttttgcaaggatgaattctccatctgtgtttgggacgcacagtttgctg
cccactaagtcagttcagctcatgagcacccagagaaacttgtgcattcctcggaatgac
atggggtcaattaatcatggtggcagcctgctcaaggatggtgtcccaggatcacagcag
aatgctagaaaattcatcttgtctggcaactcctacgcaaatgtgtcaaatggtgcgctg
tccagtgcaagcgaattgttcccttctagaagctcctttgccaattcaccaaatagcatg
gcgttcaacagaagcaaatctttcccttctggtgcttctggcaattcatttgcaaacatc
tcaaatgatagcccaccactggtcacgggcatgggctttccttgctctcgttctggcaaa
tcctatgcaagcatattgcgtggaaagatgttggcagcaagcagaggtattccttttgat
gctgacaactccttcacaaacgtagcagatggtgagatgctggctccttcgagtcatttt
ccagtgcagtctcctgacatggcgaaccagccttctgttcagatgcagtcatcttatgct
gagatattccgccaatttgtcagagaggatccccgatttgctggacttagcagctccagc
aacacctggaaaactgctgcgccgtcgaagtttcctgatctttgccataaggatggaacg
tctggaggtccctcacaggggaacagcctcaagatcaaccagttctcaagacttgcagcc
tcgtctagccagatggcaacttttggaaatgaatttcagaaccaaacggcagaactcatg
aggagagaaaccacaccaatggtaggttttaatgagcaggtggcaccattcaacttagga
agcaacgcaaactctacggcgatgacgaatgataactctgctccgggtagtgcttcaagc
atcatatcttcactgcctaatcttcagatagacaattctgtcatgccgactcagatgctg
aatggtgggggtgcaagtggcaatctctctgagcaagctttttgtgataaactgaataac
atcaacgaatccctcatgggaacaagcgaggcacagaatgggatgagtggtgacttggat
gactttttctctgactggctcaatcaagattacttcaaaaatggtgatgctttcatggat
ggggaccgggagttcgctccttga
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