Phragmites australis (common reed): 133895189
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Entry
133895189 CDS
T10575
Name
(RefSeq) probable transcription factor MYB58
KO
K09422
transcription factor MYB, plant
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133895189
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
133895189
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_Rap1
HTH_CHD1_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
133895189
NCBI-ProteinID:
XP_062191339
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All DBs
Position
16:27101668..27103191
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AA seq
328 aa
AA seq
DB search
MQKRGGGGGERPAVRKGAWTAEEDEVLLQHVREHGPQDWSSIRSKDLLPRTGKSCRLRWV
NKLRPNLKTGCKFSPEEERLVIDMQAQFGNRWARIATYLPGRTDNDVKNFWSTRQKRLAR
ILRAPLPRRRPGKQSRSASSAPSHDLPAQKPLRQGPCSDMIPFQETTHHIGQSSSQEPCT
ENQCADAPFAGLLGLELLGLPSPVEFAMDVAVECGSSSAAPTARPPFGSDAGDPVSGVAP
PAFVDHARFVDAASLQHDAVAYLEPLAVVPPAPFFGLDDDYGNVGSALHQDMSGVLFDDL
PPEAFDFFELPPSPPPFPPPSPSPAAQM
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcgcggtggcggcggtggcgagcggccggcggtgaggaagggggcgtggacg
gcggaagaggacgaggtgctgctgcagcacgtccgggagcacgggcctcaagattggagc
tccattcgatccaaggacctcctcccgcgcaccggcaagtcctgccgcctccggtgggtc
aacaagctccggccgaacctcaagacggggtgcaagttttctccggaggaagaacggttg
gtgatcgatatgcaggcgcagttcgggaacagatgggccaggatcgcgacgtatttgccc
ggacggacggacaacgacgtgaagaacttctggagcacgcggcagaagcggctggccagg
atcttgcgggcacccctgccccgccggaggcctggcaagcagagccgcagcgcttcttct
gcaccatcccatgatttgcccgcccagaagcctctccgtcagggcccgtgctctgacatg
atacccttccaggagacgacgcaccacattggccagagcagcagccaggagccatgcaca
gagaaccagtgcgccgacgcgccgttcgccggactgctcggcctggaactgctcggcctg
ccgtcccccgtcgagttcgctatggacgtggcagtagaatgcggctcgtccagcgctgct
cccacggcccgtccgcccttcggtagcgacgccggggacccggtttccggcgttgccccg
ccggcgttcgtcgaccatgctcggttcgtcgatgcggcctcgctgcagcacgacgctgtc
gcctacctggagccgctggcagtggtgccgccggccccgttcttcggcctggacgacgac
tacgggaacgtgggctctgcgctgcatcaggacatgtctggagtgctcttcgacgacctc
ccgccggaggcgttcgacttcttcgagctgccgccgtcgccacctccgttcccgccgccg
tctccgtcgcccgccgcccagatgtag
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