Phragmites australis (common reed): 133895214
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Entry
133895214 CDS
T10575
Name
(RefSeq) protein argonaute MEL1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133895214
03036 Chromosome and associated proteins [BR:
paua03036
]
133895214
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133895214
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133895214
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133895214
microRNA pathway
RISC loading complex
133895214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArgoN
Piwi
ArgoMid
PAZ
ArgoL2
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
133895214
NCBI-ProteinID:
XP_062191356
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Position
16:complement(28770506..28780424)
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AA seq
1135 aa
AA seq
DB search
MAEGGEGLGRPGGCGNPRPPYDRGPGAAGGGGSRPSGFVSLPPATTRLPVPAQYQAAPMG
YREPMALPHQAAYGHGAPVVVYRAPASAAPVLAPPPAPVPVTIRAPPPSKSPAPATHQLA
QGASRASAPALASSAPSAEVEKKLLVSETALAPPAEAAAAVALAATAEAASDVDLAPVSK
KKKGLAHSARPVPRTCGKKVMVRANHFLVDVGDNNLFHYDVMSSPLLQPLCSSTLINFYM
HAILYRLLRFGGLVWDSFATGCASSSSDETVKGYMKRFRSHPALCSYALLFVCFSVRHHC
TRQPTPRPQPANELSNPTASIGPPFHPELHNFLHSFAVAINPESKSRATNRDVLSELIKL
YGKTSLDGKLAAYDGRKSLYTASSLPFESEEFLVKLVDSEKKGKERAEREYTITIRIAGR
TDLYHLTSDSHRVKIKKALQGVCIETSHQEDQIRRYKITGITPIPMSELIFSVDEKGTTK
SVVPIEVCKIVEGQRYSKKLNDKPVTNIIRAACKRPQEREQSTRDIVLHNKYAEDRFAQE
FGIKVCSELVSVRAHVLLPPLLKYHDSGREKTCAPIVGQWNMINKKMIDGGTVDNWTCLN
FSRMHPEEVQRFCTDLIRMCSATGMAFNPKPFVEVMSAAPNHMENALRDVHRRATQMLAK
QGTGNQLQLLIVILPDFSGSYGKIKRVCETDIGIVSQCCLPKHASRPTKQYLKNVAHKIN
VKVGGRNTVLERAFVSNGIPSASEIPTTIIGDATHIPPGEDSASSITAVFVCIYGYQISM
PINLNTTTAREVVQAALMKRDIKVKDAYLRFNGRSLNEDSLLSSVYICQGSHINVTPRTR
GGVQAYHKLLFEQLSIVLQNNAHRMFKVVSVPKDHVQPNHSQSVLFLSFFSQYIIHQMLV
CVCREGHQQGYCWGGAFTLADIIISNGHIIISPNVVQMQYTSGGGDADYTQLHYIIDTAF
LEPSTNTHAIHVKHLLDLLLSDNKALRQDPNFITFVINHPCLLSYAERQMVYSLVDRMIL
RLPKRRFNKLRNLLNEKNHQSWIGIVRQVPAFLRTYLYQTYTADMDQAFHLGRNFLNHPC
PRVTLEQAEAALSNLLGYILPITVMTLVINFQNPARFNIIGIIANSNADRSTGRF
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggccgagggaggcgaaggccttggacggccgggaggctgcggcaacccacgccctccg
tacgatcggggccccggggcagccggaggcggaggaagccgacccagcggcttcgtgtcg
ctgccgccggcgacgacgcggcttccggtgcctgctcagtaccaggccgcgccgatgggc
taccgcgagcccatggcgctgccgcaccaggccgcgtacgggcacggggctccggtggtc
gtctatcgcgcgcccgcgtcagcggcgcctgtcttggcgcctccgcccgctcctgtgcca
gtcaccatccgggcgcctccgccctcgaagtctccggctccggctacgcaccagctggcg
cagggcgcctctcgggcgtccgcgccggccctggcctcctcggcgccgtcggccgaggtt
gagaagaagctgttggtgtccgagaccgcgctggcgccacccgcggaagctgctgcagcg
gtggccctggccgctaccgcggaggccgcgtcggatgtggatcttgcgccggtctcgaag
aagaaaaaggggctcgcgcactctgctcgcccggtccctcggacctgcgggaagaaggtg
atggtccgcgcgaaccacttcctcgtggacgtcggcgacaacaatctgttccactacgat
gtgatgagctcgccccttctacagcccctctgttcttctactcttatcaacttctacatg
catgctatcctttaccgcctgcttagatttggtggtcttgtgtgggatagctttgctact
ggctgtgcctctagttcgtcagatgaaacggtgaagggatatatgaaacgcttccgatct
catcctgctttatgcagctatgcgctgctgttcgtttgcttttcagttaggcaccactgc
accaggcaacccacaccaaggccacaacccgcaaatgaactctccaaccccactgcttca
attggcccgccattccacccagaacttcacaattttcttcattcatttgctgttgctatt
aatcccgaatcaaaatcaagagcaacaaatagggatgttcttagtgagctcatcaagttg
tatgggaagacatctctggacggtaaactggcagcctatgatggaaggaagagtctttat
actgcaagttcacttccttttgaatcagaggagtttttggtcaaactggttgattcggaa
aagaagggtaaagaaagggcggagagagagtatacgatcacaattcgaattgctgggaga
acagacttgtaccaccttacatcagacagccatcgtgtgaagataaaaaaagcattacag
ggagtttgcatcgaaacaagccaccaagaggaccaaatcagaagatacaagataacaggg
attactcccatccctatgagcgagctgatattctctgttgatgagaaagggacgacgaag
tctgttgtgcctatagaggtttgcaagattgtagaagggcagagatactctaagaagctt
aatgacaaaccagtgaccaacataatcagagcagcctgtaaacgtccccaggagagggag
cagagcactcgtgatatagttctgcacaacaagtatgcagaggataggtttgctcaggag
tttggcatcaaggtctgcagcgaactagtgtctgttcgagcccatgtgctgcttccacct
ttgttgaaatatcatgactctggtagggagaaaacttgtgcgcctattgttggacaatgg
aacatgattaataagaaaatgattgatggaggaactgtggataactggacttgtttgaat
ttttcacgtatgcatcctgaggaggtacaaaggttctgtacggatctgattcgtatgtgc
agtgccacaggaatggctttcaatccaaaaccatttgtagaagttatgtcagctgctcct
aaccatatggagaatgctttgagagatgtacacaggagggccacacaaatgcttgccaaa
caaggaacgggaaatcagctacaacttctaattgtaatcctgcctgactttagtggttct
tacgggaaaattaaaagagtttgtgagactgacattggaatcgtatctcaatgttgtttg
ccaaagcatgctagcaggccaaccaagcaatatctgaaaaatgttgcacacaaaatcaat
gtcaaggttggagggcgcaacacagttcttgagcgagcctttgtaagcaatggcatacca
tctgcgtcagaaatcccaacaaccatcattggtgatgccacacacatcccaccaggagag
gactctgcatcatccattactgcagtttttgtttgcatatatgggtaccaaatttccatg
cctatcaacctgaatacaacaacagcaagagaggttgttcaggctgctcttatgaaaaga
gacataaaggttaaggatgcatacttgagattcaatggaagatcgctgaatgaagatagc
ttgctaagttcagtatacatttgccagggctcacatataaatgtaactccgaggacaagg
ggtggcgtgcaagcctaccacaaattgttattcgaacaattgagcatagttctgcagaac
aatgcccacaggatgtttaaggttgtgtcggtccccaaggatcatgtgcaaccaaatcat
agtcagtcggtacttttcttgagctttttctcccaatatattatacatcagatgttagtt
tgtgtgtgccgggagggacatcaacaaggatattgctggggaggtgcgtttacgcttgcg
gatattatcatctcaaatggtcacatcataattagtcctaatgtggttcagatgcaatac
acctcaggtggtggcgatgcagattatactcaactgcattatataattgataccgccttc
cttgagccgtctacgaatacacacgcaatccatgtgaaacatttattggacttgctactg
agcgataataaggctcttaggcaagacccgaattttatcacttttgtgatcaaccatcct
tgcctcctctcttacgccgaaaggcaaatggtctattctttggtggatcggatgattctc
aggctccctaagcgaaggttcaataaattgagaaatcttttgaacgagaaaaaccaccaa
tcttggatcggcattgtacggcaggttccagctttcctgcgcacgtatttgtaccaaacg
tatactgcagatatggaccaagctttccaccttggtcgtaacttcctaaatcacccgtgt
cccagggtgacattggagcaagctgaggcggcactctcaaatctacttggatatatacta
cctatcactgtcatgactttggttataaatttccagaatcctgctagatttaatattatt
gggataatagccaactctaacgcagacagaagcacagggcgattctaa
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