Phragmites australis (common reed): 133895288
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Entry
133895288 CDS
T10575
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133895288
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133895288
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
133895288
NCBI-ProteinID:
XP_062191485
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Position
16:complement(29289718..29294617)
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AA seq
535 aa
AA seq
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MAAASSAHLFGLGNAQMQPPPLQQAAPPPPPAPAQNPATPAPKKKRNQPGNPNPDAEVIA
LSPKTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKDVRRRVYLCPEPTC
VHHDPSRALGDLTGIKKHYCRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCG
TLFSRRDSFITHRAFCDALAQESARVPPIGAEMYVSGGMAHGLSGMAASQLQSFQDQAHS
SATTAISGNPAAQFEHIMPSSTSSPTFRGAQPASFYLGGADNGQGQPSHTSLLHGKPAFH
GLMQLPEQHQPGSNGLLNLGFFSGASSGQDERLVFPDQFNGSAAGNGRGDGGDHGNSSAN
TDSAAIFSGNLMGNQMAGGAGFSSSLYNSSETVAPPQMSATALLQKAAQMGATKSGGGGG
SVNSLLRGLGSGGALNGRPAGAAGFMAGESSSRSTSQAENESQFRNLMNTLAASGSGAGA
AFTGGFPGVDDSKLSTRDFLGVGGGVVRGMNGAAGLPLRHGAAGIGMGLLDPEMK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcctcttccgcgcacttgttcggactcggcaacgcgcagatgcagccgccg
ccgctgcagcaggcggcgcctcctcctcctcctgctcctgcgcagaaccctgccacgccg
gcgcccaagaagaagaggaatcagcccggcaacccaaatcctgacgcagaggtgatcgcg
ctgtcccccaagacgctgatggcgacgaaccggttcgtgtgcgaggtgtgcaacaaaggt
ttccagcgggagcagaacctgcagctgcaccggcgtgggcacaacctgccgtggaagctg
aagcagaagaaccccaaggatgtgcggcggcgggtgtacctgtgcccagagccgacgtgc
gtgcaccacgacccgtcgcgcgcgctcggcgacctcaccgggatcaagaagcactactgc
cgcaagcacggcgagaagaagtggaagtgtgacaagtgcaacaagcgctacgccgtgcag
tcggactggaaggcgcactccaagacctgcggcacccgcgagtaccgatgcgactgcggc
acgctcttctcaaggagggatagctttatcacccaccgtgcgttctgcgacgcactggcg
caggagagcgcacgggtgccgcctatcggcgccgaaatgtacgtctccggcggcatggcc
cacggcctctccgggatggccgcttcccagctgcaatccttccaagaccaggcccactcc
tcggccaccaccgccatcagcggcaatccggcggcgcagttcgagcacatcatgccgtcc
tccaccagctcccccacgttccgtggcgcgcagccggcctcattctatctagggggtgcc
gacaacggccaaggccaacccagccacacctctctgctccacggcaagccggccttccac
ggcctgatgcagctgccggagcagcaccagccggggagcaacggcctcctgaacttgggg
ttcttctcgggcgcgagcagcggtcaggacgagcgcctcgtcttcccagaccagttcaac
ggttccgcggccgggaacggccgcggcgatggcggcgatcacggcaacagcagcgccaac
accgattcggcagctatcttctcggggaatctaatgggaaaccaaatggcaggcggcgcc
ggcttctcttcttccttgtacaactcgtccgagaccgtcgcgccgccgcagatgtccgcg
acagcactgctgcagaaagccgctcagatgggcgcgacgaagagcggcggcggaggcggc
agcgtgaactcgctgctcagggggctcggtagcggcggcgctttgaacgggagacctgcc
ggagcagctgggttcatggcaggtgagagctcgtcgaggagcacttcccaggcggagaac
gagagccagttccggaacctcatgaacacgctcgcggcttccgggagtggagccggcgca
gcgttcaccggtggcttccccggcgtggacgacagcaagctgagcacgagggacttcctt
ggcgtcggcggcggcgtcgtgcggggcatgaacggcgcggcggggctgccgctgcggcac
ggtgccgcgggcattggcatgggattattggacccagaaatgaagtag
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