Phragmites australis (common reed): 133895328
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Entry
133895328 CDS
T10575
Name
(RefSeq) KH domain-containing protein At4g18375-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133895328
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133895328
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
133895328
NCBI-ProteinID:
XP_062191553
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Position
16:6900695..6906921
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AA seq
632 aa
AA seq
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MRQQTGKRTRQHRDYDREERNDQKKRPFPHAQESFNNDELVVYRILCPDSVIGSVIGKNG
NVINAIRQQTNAKVKVVDPYPGSDKRVILVYCYIKHRDLDVDEGDNGEPVCAAQDALFRV
QNAIADALDTLNKTRRDSDKKNTEEANILVPASQAASIIGKSGAVIKYLRSTSRAFIKVS
PKDPSDTTHSCAMSFDNFVQITGGAEAVRKALFGISTIIYKYPSKENIPLETSVPELTSS
IIVPSELPVYPASNFYSAPDAAIPSGHPSLSILGSSPHVPELTLPADAHGRLPIYQSVLP
SIPTYSTPRCSGDLVFRVLCPGDKIGLVIGRGGGTIKSIRQESGARIDVDDAKNDREESI
ITITSTESTDDVKSAAVEAVLLLQAKINDYDEDRMNLRLLVPTKVIGCLIGKGGSIVNDM
RKKTKAGIRISKGDKPRRASSSDELVEVFGEADKLRDALVHIVLRLREDVLKDRMDSQNS
DRDGKLNVATTDSFYGSLSLPALLPCSQQVTPLGYDRRDETERGLEVFPRSSSYGYSSLQ
VADDGYGGLSSYTSKAYEGRLPRVEMTIPASGLSKVMGKRGTNLDNIRKISGAHIEIIES
KSSRHDHVAHISGTSEQRQSAENLIKAFIMST
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagcagactggtaaacgtacccggcaacacagggactatgacagagaagaaagg
aacgaccaaaagaagaggccatttccccatgcccaggaaagctttaataacgatgaattg
gttgtttaccgtatactctgtccagacagtgtgattggtagtgtaataggaaagaatggc
aatgtgataaatgctatcaggcaacagacaaatgccaaagtcaaggttgttgacccttac
cctggttcagacaaaagggttatcttggtttattgctacatcaagcatagagacttggat
gttgatgagggtgataacggtgagcctgtttgtgcagctcaagatgcattatttagagtg
cagaatgcaattgctgatgctctagatacgttaaataagactcgtagagactctgataag
aagaatacagaagaagcaaacatccttgtaccagctagtcaggctgcaagtattatagga
aaatccggtgctgtcatcaaatatcttcggtcaacatcgagagcattcattaaagtgagc
ccaaaagatccaagcgacactacacactcatgtgctatgagttttgataattttgttcag
ataactggtggtgctgaagctgttagaaaggcactgtttggaatatcaaccattatttac
aagtacccatcgaaagagaacattcctcttgaaacttctgttcctgaacttacttcaagc
attatagttccttcagaacttcctgtatatcctgctagtaacttctactcagccccagat
gctgctataccttctggacatccaagtctatctatcttagggtcatcacctcatgttcct
gaacttactctgcctgctgatgctcatggccgattgcctatttatcaatctgttcttcca
agtattcctacttatagtaccccaaggtgttcaggagatctagtattccgtgttttatgc
cctggtgacaagattgggttggttattggtaggggtggggggaccataaagagtataagg
caagagagtggtgcaaggatagatgttgatgatgcaaagaatgacagggaggaaagtata
atcaccattacatccactgagtccacagatgatgttaaatctgcagctgtggaagctgtt
ttgctgcttcaagcaaagatcaacgattacgatgaagatagaatgaatcttcgccttctt
gtcccaactaaggttataggctgtcttattggcaagggtggttccatagtcaatgacatg
cggaagaagactaaggcaggcatccgcatatcgaagggtgataagccccggagggcatct
tccagtgatgagcttgttgaggtatttggagaagcggacaagctgcgcgatgctctcgta
catatagttttaagactcagggaagatgttctgaaagacaggatggacagccaaaattct
gacagggatggcaagctaaatgttgccaccactgattccttctatggaagtctttctttg
cctgcattattaccttgcagccaacaagtcactccgttgggctatgatcgaagggatgaa
actgagcgaggtctggaagtattccctcgtagcagttcgtatgggtatagctccttgcag
gttgcagatgatggctatggaggactttcgtcatatacatcaaaggcatatgaaggacgt
cttccacgtgtggaaatgactattcctgctagtggcctgtccaaagtaatgggaaaacgt
ggcacaaacttggacaatattagaaagatttctggagctcacattgaaattattgaatca
aaatcatctcgtcatgaccatgttgctcacatatctggcacctctgagcagaggcaatca
gctgagaatttgatcaaagctttcataatgtctacttaa
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