Phragmites australis (common reed): 133895329
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Entry
133895329 CDS
T10575
Name
(RefSeq) ABC transporter B family member 1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133895329
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133895329
04147 Exosome [BR:
paua04147
]
133895329
04090 CD molecules [BR:
paua04090
]
133895329
Enzymes [BR:
paua01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133895329
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133895329
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133895329
CD molecules [BR:
paua04090
]
Proteins
133895329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_29
AAA_22
Zeta_toxin
nSTAND1
RsgA_GTPase
AAA_25
DUF6264
AAA_5
AAA_30
DUF87
DUF815
Rad17
Motif
Other DBs
NCBI-GeneID:
133895329
NCBI-ProteinID:
XP_062191556
LinkDB
All DBs
Position
16:29837498..29843554
Genome browser
AA seq
1366 aa
AA seq
DB search
MSSDPEEIRARVVVLGAHADAADEWARPELEAFHLPSPSHQPPRFLGEEDQATPPPHPEP
EAPPATNTCSSSPAAAPPPSPPPPAPLETEQPPNAKPSSSSNNDKNPSPPAALRDLFRFA
DGLDCILMAVGTLGALVHGCSLPVFLRFFADLVDSFGSHANDPDTMVRLVVKYAFYFLVV
GAAIWASSWAEISCWMWTGERQSTRMRIRYLEAALRQDVSFFDTDVRTSDVIYAINADAV
IVQDAISEKLGNLIHYMATFVAGFVVGFTAAWQLALVTLAVVPLIAVIGGLSAAALAKLS
SRSQDALSNASNIAEQALAQIRIVQAFVGEERAMRAYSAALAVAQRVGYRSGFAKGLGLG
GTYFTVFCCYALLLWYGGHLVRRHHTNGGLAIATMFSVMIGGLALGQSAPSMAAFAKARV
AAAKIFRIIDHKPRIERDGEGGVELESVTGRVEMRNVDFAYPSRPDVPILRGFSLSVPAG
KTIALVGSSGSGKSTVVSLIERFYDPNAGQILLDGHDLKALKLRWVRQQIGLVSQEPTLF
ATSIKENLLLGRESQGATQAEMEEAARVANAHSFIIKLPDGYDTQVGERGLQLSGGQKQR
IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLV
AVLQGGAVSEVGTHDELMAKGENGTYAKLIRMQEQAHEAALVNARRSSARPSSARNSVSS
PIMTRNSSYGRSPYSRRLSDFSTSDFSLSIHDPSHHHHHRMAEKLAFRAGASSFWRLAKM
NSPEWGYALVGSLGSMVCGSFSAIFAYILSAVLSVYYAPDPRHMKREIGKYCYLLIGMSS
AALLFNTVQHVFWDTVGENLTKRVRDKMFAAVLRNEIAWFDAEENASARVAARLALDAQN
VRSAIGDRISIIVQNSALMLVACTAGFILQWRLALVLLAVFPLVVGATVLQKMFMKGFSG
DLEGAHARATQIAGEAVANLRTVAAFNAEGKITGLFEANLRGPLRRCFWKGQIAGSGYGV
AQFLLYASYALGLWYAAWLVKHGISDFSRTIRVFMVLMVSANGAAETLTLAPDFIKGGRA
MHSVFETIDRKTEVEPDDVDAAPVPERPRGEVELKHVDFSYPSRPDIQVFQDLSLRARAG
RTLALVGPSGCGKSSVLALIQRFYEPTSGRVLLDGKDVRKYNLQALRRVIAMVPQEPFLF
AASIHDNIAYGREGATEAEVVEAATQANAHKFISALPEGYRTQVGERGVQLSGGQRQRIA
IARALVKQAAIMLLDEATSALDAESERCVQEALERAGSGRTTIVVAHRLATVRNAHTIAV
IDDGKVMEQGSHSHLLNHHPDGCYARMLQLQRLTGATAASTSNGTA
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcgaccccgaggagatcagggcccgcgtcgtcgtcctcggcgcccacgccgac
gcagccgacgagtgggcccgtccggagctagaggccttccacctcccctccccctcccat
cagcccccccgcttcctaggagaggaggaccaagcaacgccacctcctcacccagaacca
gaagcaccccccgccaccaacacatgtagcagcagcccagctgccgctcctcctccgtcg
ccgccgcctcctgcgccactggagaccgagcagccgcccaatgctaaaccatcgtcctcc
tccaacaatgacaagaacccgtccccgcctgccgccctgcgcgacctcttccgcttcgcc
gacggcctcgactgcatcctcatggccgtcggcacactcggcgctctcgtccacggctgc
tcccttccggtcttcctccgcttcttcgccgacctcgttgactccttcggctcccatgcc
aacgacccggacaccatggtccgcctcgtcgtcaagtacgccttctacttcctcgtcgtc
ggagcagccatttgggcatcctcatgggcagagatctcgtgctggatgtggaccggcgag
cgccagtcgacgaggatgcggatccgctacctggaggcggcgctgcgccaggacgtctcc
ttcttcgacaccgatgtccgcacctccgacgtcatctacgccatcaacgccgacgcagtc
atcgtgcaggacgccatcagcgagaagctcggcaacctcatccactacatggccaccttt
gtcgcaggcttcgtcgtcggattcaccgccgcctggcagctcgcgctcgtcacgctcgcc
gtcgtgccgctcatcgccgtcatcggcggcctcagcgccgctgcgctcgccaagctctcc
tccaggagccaggacgcgctctccaacgccagcaacatcgccgagcaggcgctcgcgcag
atacggatcgtgcaggccttcgtcggcgaggagcgcgcaatgcgggcctactcggcggcg
ctcgccgtggcgcagagggtcggctaccgcagcggcttcgccaagggcctcggcctcggc
ggcacctacttcaccgtcttctgctgctacgcgctgctgctctggtacggcggccacctc
gtgcgccgccaccacaccaacggtggcctcgccatcgcaaccatgttctccgtcatgatc
ggcggcctggccctggggcagtctgcgccgagcatggcggcgttcgccaaggcgcgcgtg
gcggcggcgaagatattccggatcatcgaccacaagccgcgcatcgagcgggacggcgag
ggcggcgtggagctggagtcagtgacggggcgggtggagatgaggaacgtggacttcgcg
tacccgtcccggccggacgtccccatcctgcgcggcttctcgctgagcgtgcccgctggg
aagaccatcgcgctggtcggcagctccggctccggcaagagcaccgtcgtgtccctcatc
gagaggttctacgacccgaatgcagggcaaatcctgcttgacgggcatgatctcaaggca
ctgaagctgcgttgggtgcggcagcagattgggttggtgagccaggagccgacgctgttc
gcgacgagcatcaaggagaacctgctgctggggcgggaaagccagggcgcgacgcaggcg
gagatggaggaggcggccagggttgccaacgcccactccttcatcatcaagctgcccgat
ggctacgacacgcaggtgggcgagcgcggcctgcagctctccggcggccagaagcagcgc
atcgccatcgcccgcgccatgctcaagaacccggccatcctcctgctggacgaggccacc
agcgccctcgactccgagtctgagaagctcgtgcaagaggcgctcgaccgcttcatgatc
ggccgcaccacgctcgtcatcgcccacaggctctccaccatccgcaaggccgacctcgtc
gccgtcctgcagggcggtgccgtctccgaggtgggcacgcacgacgagctcatggccaag
ggggagaacggcacctacgccaagctcatccgaatgcaggagcaggcgcacgaggccgcc
ctcgtcaacgccaggaggagcagcgccaggccctccagcgcccgcaactccgtcagctcc
cccatcatgacgcgcaactcctcctacggccgctcgccctactcccgccgcctctccgac
ttctccacctccgacttcagcctctccatccacgaccccagccaccaccatcaccaccgg
atggcggagaagctggcgttccgcgcgggggccagctccttctggcgcctggccaagatg
aactcgcccgagtggggctacgcgctcgtcggttccctcggctccatggtgtgcggctcc
ttcagcgccatcttcgcctacatcctcagcgccgtgctcagcgtctactacgcgccggac
ccccggcacatgaagcgcgagatcggcaagtactgctacctgctcatcggcatgtcctcg
gcggcgctgctcttcaacacggtgcagcacgtgttctgggacaccgtgggcgagaacctt
accaagcgtgtgcgcgataagatgttcgccgctgtgctccgcaacgagatcgcctggttc
gacgccgaggagaacgccagcgcgcgcgtcgccgccaggctcgcgctcgacgcccagaac
gtgcgctccgccatcggggaccgcatctccatcatcgtccagaactcggcgctcatgctc
gtggcctgcaccgcgggcttcattctgcagtggcgtcttgcgctcgtactcctcgccgtc
ttccctctcgttgtcggcgccaccgtcctgcagaagatgttcatgaagggcttctccggg
gacctggagggcgcgcacgctcgggccacgcagatcgctggtgaggccgtggcgaacttg
cgcactgtggcggctttcaacgcggagggcaagatcacgggactcttcgaggccaacctg
cgtggccctctccggcggtgcttctggaagggccagatagccgggagcggctacggcgtg
gcacagttcctgctgtacgcgtcgtacgcgctgggcctgtggtacgcggcgtggctcgtc
aagcacggcatctccgacttctccaggaccatccgcgtgttcatggtgctgatggtctcc
gccaacggcgctgccgagacgctgacgctggcgccggacttcatcaagggcgggcgcgcc
atgcactcggtgttcgagaccatcgaccgcaagacggaggtggagcccgacgacgtggac
gcggcgccggtgcccgagcgccccaggggcgaggtggagctcaagcatgtcgacttctcg
tacccgtcccggccggacatccaggtgttccaggacctgagcctccgcgcgcgcgccggc
aggacgctggcgctggtcgggccgagcggatgcggcaagagctcggtgctggcgctgatc
cagcggttctacgagcccacgtccgggcgcgtgctcctggacggcaaggacgtgcgcaag
tacaacctgcaggcgctgcggcgcgtgatcgcgatggtgccgcaggagccgttcctgttc
gcggccagcatccatgacaacatcgcgtacggtcgtgagggcgcaacggaggcggaggtg
gtggaggcggcgacgcaggcgaacgcgcacaagttcatctcggcactgccggagggatac
aggactcaggtgggcgagcgcggggtgcagctgtcgggcgggcagcggcagcggatcgcc
atcgcgcgcgcgctggttaagcaggcggccatcatgctgctggacgaggcgaccagcgcg
ctggacgcggagtcggagcggtgcgtgcaggaggcactggagcgcgcggggtcggggcgc
accaccatcgtggtggcgcaccggctggcgacggtgcgcaatgcccacacgatcgccgtg
atcgacgacggcaaggtgatggagcaggggtcgcactcgcacctgctcaaccaccaccct
gacggatgctacgcgcgcatgctgcagctgcagcggctgaccggtgccactgcggcgtcg
acgtcgaacgggactgcgtag
DBGET
integrated database retrieval system
